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本文引用的文献

1
Separation and Visualization of Low Abundant Ubiquitylated Forms.低丰度泛素化形式的分离与可视化
Bio Protoc. 2018 Nov 20;8(22):e3081. doi: 10.21769/BioProtoc.3081.
2
Dual role of a GTPase conformational switch for membrane fusion by mitofusin ubiquitylation.GTPase 构象开关在通过线粒体融合蛋白泛素化介导的膜融合中的双重作用。
Life Sci Alliance. 2019 Dec 19;3(1). doi: 10.26508/lsa.201900476. Print 2020 Jan.
3
Plasticity in salt bridge allows fusion-competent ubiquitylation of mitofusins and Cdc48 recognition.盐桥的可塑性允许融合 competent 的泛素化和 Cdc48 的识别。
Life Sci Alliance. 2019 Nov 18;2(6). doi: 10.26508/lsa.201900491. Print 2019 Dec.
4
Cdc48 regulates a deubiquitylase cascade critical for mitochondrial fusion.Cdc48调控对线粒体融合至关重要的去泛素化酶级联反应。
Elife. 2018 Jan 8;7:e30015. doi: 10.7554/eLife.30015.
5
Cycloheximide Chase Analysis of Protein Degradation in Saccharomyces cerevisiae.酿酒酵母中蛋白质降解的放线菌酮追踪分析
J Vis Exp. 2016 Apr 18(110):53975. doi: 10.3791/53975.
6
Two deubiquitylases act on mitofusin and regulate mitochondrial fusion along independent pathways.两种去泛素化酶作用于线粒体融合蛋白并沿独立途径调节线粒体融合。
Mol Cell. 2013 Feb 7;49(3):487-98. doi: 10.1016/j.molcel.2012.12.003. Epub 2013 Jan 11.
7
SDS-Polyacrylamide Gel Electrophoresis of Proteins.蛋白质的十二烷基硫酸钠-聚丙烯酰胺凝胶电泳
CSH Protoc. 2006 Sep 1;2006(4):pdb.prot4540. doi: 10.1101/pdb.prot4540.
8
Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6.真核生物 60S 核糖体亚基与起始因子 6 复合物的晶体结构。
Science. 2011 Nov 18;334(6058):941-8. doi: 10.1126/science.1211204. Epub 2011 Nov 3.
9
Ugo1 and Mdm30 act sequentially during Fzo1-mediated mitochondrial outer membrane fusion.Ugo1 和 Mdm30 在 Fzo1 介导的线粒体外膜融合过程中顺序发挥作用。
J Cell Sci. 2011 Apr 1;124(Pt 7):1126-35. doi: 10.1242/jcs.073080. Epub 2011 Mar 8.
10
Combined chemical and genetic approach to inhibit proteolysis by the proteasome.联合化学和遗传方法抑制蛋白酶体的蛋白水解作用。
Yeast. 2010 Nov;27(11):965-74. doi: 10.1002/yea.1805.

通过合成阻断分析蛋白质稳定性

Analysis of Protein Stability by Synthesis Shutoff.

作者信息

Buntenbroich Ira, Simões Tânia, Escobar-Henriques Mafalda

机构信息

Institute for Genetics, Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases, University of Cologne, Cologne, Germany.

出版信息

Bio Protoc. 2021 Nov 20;11(22):e4225. doi: 10.21769/BioProtoc.4225.

DOI:10.21769/BioProtoc.4225
PMID:34909446
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8635844/
Abstract

In this protocol, we describe the analysis of protein stability over time, using synthesis shutoff. As an example, we express HA-tagged yeast mitofusin Fzo1 in and inhibit translation via cycloheximide (CHX). Proteasomal inhibition with MG132 is performed, as an optional step, before the addition of CHX. Proteins are extracted via trichloroacetic acid (TCA) precipitation and subsequently separated via SDS-PAGE. Immunoblotting and antibody-decoration are performed to detect Fzo1 using HA-specific antibodies. We have adapted the method of blocking protein translation with cycloheximide to analyze the stability of high molecular weight proteins, including post-translational modifications and their impact on protein turnover.

摘要

在本实验方案中,我们描述了使用合成阻断法对蛋白质随时间的稳定性进行分析。例如,我们在酵母中表达HA标签的酵母线粒体融合蛋白Fzo1,并通过环己酰亚胺(CHX)抑制翻译。作为一个可选步骤,在添加CHX之前,先用MG132进行蛋白酶体抑制。通过三氯乙酸(TCA)沉淀提取蛋白质,随后通过SDS-PAGE进行分离。使用HA特异性抗体进行免疫印迹和抗体标记以检测Fzo1。我们采用了用环己酰亚胺阻断蛋白质翻译的方法来分析高分子量蛋白质的稳定性,包括翻译后修饰及其对蛋白质周转的影响。