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基于免疫信息学的 . 多结构域外表面抗原的多表位嵌合疫苗设计

Immunoinformatics-Based Designing of a Multi-Epitope Chimeric Vaccine From Multi-Domain Outer Surface Antigens of .

机构信息

Laboratory of Structural Biology, Department of Biochemistry, School of Life Sciences, University of Hyderabad, Hyderabad, India.

出版信息

Front Immunol. 2021 Nov 30;12:735373. doi: 10.3389/fimmu.2021.735373. eCollection 2021.

Abstract

Accurate information on antigenic epitopes within a multi-domain antigen would provide insights into vaccine design and immunotherapy. The multi-domain outer surface immunoglobulin-like (Lig) proteins LigA and LigB, consisting of 12-13 homologous bacterial Ig (Big)-like domains, are potential antigens of . Currently, no effective vaccine is available against pathogenic . Both the humoral immunity and cell-mediated immunity of the host play critical roles in defending against infection. Here, we used immunoinformatics approaches to evaluate antigenic B-cell lymphocyte (BCL) and cytotoxic T-lymphocyte (CTL) epitopes from Lig proteins. Based on certain crucial parameters, potential epitopes that can stimulate both types of adaptive immune responses were selected to design a chimeric vaccine construct. Additionally, an adjuvant, the mycobacterial heparin-binding hemagglutinin adhesin (HBHA), was incorporated into the final multi-epitope vaccine construct with a suitable linker. The final construct was further scored for its antigenicity, allergenicity, and physicochemical parameters. A three-dimensional (3D) modeled construct of the vaccine was implied to interact with Toll-like receptor 4 (TLR4) using molecular docking. The stability of the vaccine construct with TLR4 was predicted with molecular dynamics simulation. Our results demonstrate the application of immunoinformatics and structure biology strategies to develop an epitope-specific chimeric vaccine from multi-domain proteins. The current findings will be useful for future experimental validation to ratify the immunogenicity of the chimera.

摘要

准确的抗原表位信息在多结构域抗原中提供了疫苗设计和免疫治疗的深入了解。由 12-13 个同源细菌免疫球蛋白 (Big)-样结构域组成的多结构域外表面免疫球蛋白样 (Lig) 蛋白 LigA 和 LigB 是 的潜在抗原。目前,针对致病性 的有效疫苗尚未问世。宿主的体液免疫和细胞介导的免疫在抵御 感染中起着至关重要的作用。在这里,我们使用免疫信息学方法来评估 Lig 蛋白的抗原 B 细胞淋巴细胞 (BCL) 和细胞毒性 T 淋巴细胞 (CTL) 表位。基于某些关键参数,选择了能够刺激两种适应性免疫反应的潜在表位,以设计嵌合疫苗构建体。此外,将分枝杆菌肝素结合血凝素粘附素 (HBHA) 作为佐剂纳入最终的多表位疫苗构建体中,并使用合适的接头。最后构建物的抗原性、变应原性和物理化学参数进行了进一步评分。使用分子对接模拟了疫苗的三维 (3D) 模型构建体与 Toll 样受体 4 (TLR4) 的相互作用。使用分子动力学模拟预测了疫苗与 TLR4 的稳定性。我们的结果表明,免疫信息学和结构生物学策略可用于从多结构域蛋白中开发表位特异性嵌合疫苗。这些发现将有助于未来的实验验证,以证实嵌合体的免疫原性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4299/8670241/de253bdbd1db/fimmu-12-735373-g001.jpg

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