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一种用于筛选和表征新型乙型肝炎病毒衣壳组装调节剂的自动化微流控平台。

An automated microfluidic platform for the screening and characterization of novel hepatitis B virus capsid assembly modulators.

机构信息

Institute of Chemical Research of Catalonia (ICIQ), Av. Països Catalans 16, 43007, Tarragona, Spain.

AiCuris Anti-infective Cures AG, Friedrich-Ebert-Str. 475, 42117, Wuppertal, Germany.

出版信息

Anal Methods. 2022 Jan 6;14(2):135-146. doi: 10.1039/d1ay01227d.

DOI:10.1039/d1ay01227d
PMID:34918017
Abstract

To date, hepatitis B virus (HBV) capsid assembly modulators (CAMs), which target the viral core protein and induce the formation of non-functional viral capsids, have been identified and characterized in microtiter plate-based biochemical or cell-based assays. In this work, we developed an automated microfluidic screening assay, which uses convection-dominated Taylor-Aris dispersion to generate high-resolution dose-response curves, enabling the measurements of compound EC values at very short incubation times. The measurement of early kinetics down to 7.7 seconds in the microfluidic format was utilized to discriminate between the two different classes of CAMs known so far. The CAM (-N), leading to the formation of morphologically normal capsids and the CAM (-A), leading to aberrant HBV capsid structures. CAM-A compounds like BAY 41-4109 and GLS4 showed rapid kinetics, with assembly rates above 80% of the core protein after only a 7 second exposure to the compound, whereas CAM-N compounds like ABI-H0731 and JNJ-56136379 showed significantly slower kinetics. Using our microfluidic system, we characterized two of our in-house screening compounds. Interestingly, one compound showed a CAM-N/A intermediate behavior, which was verified with two standard methods for CAM classification, size exclusion chromatography, and anti-HBc immunofluorescence microscopy. With this proof-of-concept study, we believe that this microfluidic system is a robust primary screening tool for HBV CAM drug discovery, especially for the hit finding and hit-to-lead optimization phases. In addition to EC values, this system gives valuable first information about the mode of action of novel CAM screening compounds.

摘要

迄今为止,已经在基于微孔板的生化或基于细胞的测定中鉴定并表征了针对病毒核心蛋白并诱导形成无功能病毒衣壳的乙型肝炎病毒 (HBV) 衣壳组装调节剂 (CAM)。在这项工作中,我们开发了一种自动化微流控筛选测定法,该测定法利用对流主导的 Taylor-Aris 分散作用来生成高分辨率的剂量反应曲线,从而能够在非常短的孵育时间内测量化合物的 EC 值。在微流控格式中测量最早的动力学时间短至 7.7 秒,可用于区分迄今为止已知的两种不同类型的 CAM。CAM(-N),导致形成形态正常的衣壳和 CAM(-A),导致异常的 HBV 衣壳结构。CAM-A 类化合物,如 BAY 41-4109 和 GLS4,显示出快速的动力学,在仅接触化合物 7 秒后,组装率超过核心蛋白的 80%,而 CAM-N 类化合物,如 ABI-H0731 和 JNJ-56136379,显示出明显较慢的动力学。使用我们的微流控系统,我们对我们的两种内部筛选化合物进行了表征。有趣的是,一种化合物表现出 CAM-N/A 中间行为,这通过两种用于 CAM 分类的标准方法,即分子筛层析和抗 HBc 免疫荧光显微镜得到了验证。通过这项概念验证研究,我们相信该微流控系统是一种强大的 HBV CAM 药物发现的初步筛选工具,特别是在发现命中和命中至先导优化阶段。除 EC 值外,该系统还提供了有关新型 CAM 筛选化合物作用模式的有价值的初步信息。

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引用本文的文献

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In Silico Pharmacol. 2025 Feb 25;13(1):35. doi: 10.1007/s40203-025-00314-8. eCollection 2025.
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Binding characteristics of pyrrole-scaffold hepatitis B virus capsid inhibitors and identification of novel potent compounds.吡咯骨架乙肝病毒衣壳抑制剂的结合特性及新型强效化合物的鉴定
RSC Adv. 2023 Oct 6;13(41):29004-29022. doi: 10.1039/d3ra04720b. eCollection 2023 Sep 26.
3
Molecular elucidation of drug-induced abnormal assemblies of the hepatitis B virus capsid protein by solid-state NMR.
利用固态 NMR 技术对乙型肝炎病毒衣壳蛋白诱导的异常聚集进行分子解析。
Nat Commun. 2023 Jan 28;14(1):471. doi: 10.1038/s41467-023-36219-3.