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海鞘的发育表和三维胚胎学图像资源

Developmental Table and Three-Dimensional Embryological Image Resource of the Ascidian .

作者信息

Funakoshi Haruka M, Shito Takumi T, Oka Kotaro, Hotta Kohji

机构信息

Department of Biosciences and Informatics, Faculty of Science and Technology, Keio University, Yokohama, Japan.

Waseda Research Institute for Science and Engineering, Waseda University, Shinjuku, Japan.

出版信息

Front Cell Dev Biol. 2021 Dec 17;9:789046. doi: 10.3389/fcell.2021.789046. eCollection 2021.

Abstract

is an ascidian in the class of chordates-the closest relatives of vertebrates. . is a potential model organism for bio-imaging studies due to its extremely transparent embryos as well as is a globally distributed cosmopolitan species. However, there is no standard developmental table for this organism. Here, as a first step to establish . as a model organism, we report a standard developmental table as a web-based digital image resource. This resource used confocal laser scanning microscopy to scan more than 3,000 cross-sectional images and 3D-reconstructed images of . embryos during embryogenesis. With reference to the standardized developmental table of type A, 26 different developmental stages (Stages 1-26) from fertilized eggs to hatched larvae were redefined for . . Cell lineages up to the cleavage period were annotated: The cleavage patterns, the embryonic morphology, and the developmental time were then compared with . We found that the cleavage patterns and developmental time up to the neurula period in . were extremely conserved versus. . The ratio of the trunk and tail length in the tailbud period were smaller than indicating a relatively short tail. In addition, the timing of the bending of the tail is earlier than . This . standard 3D digital resource is essential for connecting different omics data to different spatiotemporal hierarchies and is useful for a system-level understanding of chordate development and evolution.

摘要

是脊索动物门的一种海鞘——脊椎动物的近亲。由于其胚胎极其透明,它是生物成像研究的潜在模式生物,并且是一种全球分布的世界性物种。然而,这种生物没有标准的发育表。在这里,作为将其确立为模式生物的第一步,我们报告了一个基于网络的数字图像资源的标准发育表。该资源使用共聚焦激光扫描显微镜扫描了超过3000张海鞘胚胎在胚胎发育过程中的横截面图像和三维重建图像。参照A型海鞘的标准化发育表,为海鞘重新定义了从受精卵到孵化幼虫的26个不同发育阶段(阶段1 - 26)。注释了直至卵裂期的细胞谱系:然后将卵裂模式、胚胎形态和发育时间与A型海鞘进行比较。我们发现,海鞘在神经胚期之前的卵裂模式和发育时间与A型海鞘相比极其保守。尾芽期躯干和尾巴长度的比例小于A型海鞘,表明尾巴相对较短。此外,尾巴弯曲的时间比A型海鞘早。这个海鞘标准三维数字资源对于将不同的组学数据与不同的时空层次联系起来至关重要,并且有助于从系统层面理解脊索动物的发育和进化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f9c2/8718802/fbc4fbbaf917/fcell-09-789046-g001.jpg

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