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Mol Ecol Resour. 2021 Jan;21(1):263-286. doi: 10.1111/1755-0998.13252. Epub 2020 Oct 10.
3
Evolution of Ty1 copy number control in yeast by horizontal transfer and recombination.酵母中 Ty1 拷贝数控制的水平转移和重组进化。
PLoS Genet. 2020 Feb 21;16(2):e1008632. doi: 10.1371/journal.pgen.1008632. eCollection 2020 Feb.
4
RaGOO: fast and accurate reference-guided scaffolding of draft genomes.RaGOO:快速准确的基于参考的草图基因组组装。
Genome Biol. 2019 Oct 28;20(1):224. doi: 10.1186/s13059-019-1829-6.
5
Horizontal transfer and proliferation of Tsu4 in Saccharomyces paradoxus.Tsu4在奇异酵母中的水平转移与增殖
Mob DNA. 2018 Jun 12;9:18. doi: 10.1186/s13100-018-0122-7. eCollection 2018.
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Minimap2: pairwise alignment for nucleotide sequences.Minimap2:核苷酸序列的两两比对。
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BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs.BUSCO:利用单拷贝同源基因评估基因组组装和注释的完整性。
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8
Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement.Pilon:一种用于全面微生物变异检测和基因组组装改进的集成工具。
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Saccharomyces eubayanus and Saccharomyces uvarum associated with the fermentation of Araucaria araucana seeds in Patagonia.与巴塔哥尼亚南洋杉种子发酵相关的真贝酵母和葡萄汁酵母。
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A Gondwanan imprint on global diversity and domestication of wine and cider yeast Saccharomyces uvarum.冈瓦纳对葡萄酒和苹果酒酵母葡萄汁有孢汉逊酵母全球多样性及驯化的影响。
Nat Commun. 2014 Jun 2;5:4044. doi: 10.1038/ncomms5044.

葡萄汁酵母菌株CBS 7001的长读长基因组组装

Long-Read Genome Assembly of Saccharomyces uvarum Strain CBS 7001.

作者信息

Chen Jingxuan, Garfinkel David J, Bergman Casey M

机构信息

Institute of Bioinformatics, University of Georgia, Athens, Georgia, USA.

Department of Genetics, University of Georgia, Athens, Georgia, USA.

出版信息

Microbiol Resour Announc. 2022 Jan 20;11(1):e0097221. doi: 10.1128/mra.00972-21. Epub 2022 Jan 6.

DOI:10.1128/mra.00972-21
PMID:34989601
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8759399/
Abstract

Here, we report a long-read genome assembly for Saccharomyces uvarum strain CBS 7001 based on PacBio whole-genome shotgun sequence data. Our assembly provides an improved reference genome for an important yeast in the clade.

摘要

在此,我们基于PacBio全基因组鸟枪法序列数据,报告了葡萄汁酵母菌株CBS 7001的长读长基因组组装结果。我们的组装为该进化枝中的一种重要酵母提供了一个改进的参考基因组。