Americus Benjamin, Hams Nicole, Klompen Anna M L, Alama-Bermejo Gema, Lotan Tamar, Bartholomew Jerri L, Atkinson Stephen D
Department of Microbiology, Oregon State University, Corvallis, Oregon, United States of America.
Columbia River Fish and Wildlife Conservation Office, U.S. Fish and Wildlife Service, Vancouver, Washington, United States of America.
PeerJ. 2021 Dec 15;9:e12606. doi: 10.7717/peerj.12606. eCollection 2021.
Cnidarians are the most ancient venomous organisms. They store a cocktail of venom proteins inside unique stinging organelles called nematocysts. When a cnidarian encounters chemical and physical cues from a potential threat or prey animal, the nematocyst is triggered and fires a harpoon-like tubule to penetrate and inject venom into the prey. Nematocysts are present in all Cnidaria, including the morphologically simple Myxozoa, which are a speciose group of microscopic, spore-forming, obligate parasites of fish and invertebrates. Rather than predation or defense, myxozoans use nematocysts for adhesion to hosts, but the involvement of venom in this process is poorly understood. Recent work shows some myxozoans have a reduced repertoire of venom-like compounds (VLCs) relative to free-living cnidarians, however the function of these proteins is not known.
We searched for VLCs in the nematocyst proteome and a time-series infection transcriptome of , a myxozoan parasite of salmonid fish. We used four parallel approaches to detect VLCs: BLAST and HMMER searches to preexisting cnidarian venom datasets, the machine learning tool ToxClassifier, and structural modeling of nematocyst proteomes. Sequences that scored positive by at least three methods were considered VLCs. We then mapped their time-series expressions in the fish host and analyzed their phylogenetic relatedness to sequences from other venomous animals.
We identified eight VLCs, all of which have closely related sequences in other myxozoan datasets, suggesting a conserved venom profile across Myxozoa, and an overall reduction in venom diversity relative to free-living cnidarians. Expression of the VLCs over the 3-week fish infection varied considerably: three sequences were most expressed at one day post-exposure in the fish's gills; whereas expression of the other five VLCs peaked at 21 days post-exposure in the intestines, coinciding with the formation of mature parasite spores with nematocysts. Expression of VLC genes early in infection, prior to the development of nematocysts, suggests venoms in have been repurposed to facilitate parasite invasion and proliferation within the host. Molecular phylogenetics suggested some VLCs were inherited from a cnidarian ancestor, whereas others were more closely related to sequences from venomous non-Cnidarian organisms and thus may have gained qualities of venom components convergent evolution. The presence of VLCs and their differential expression during parasite infection enrich the concept of what functions a "venom" can have and represent targets for designing therapeutics against myxozoan infections.
刺胞动物是最古老的有毒生物。它们在称为刺丝囊的独特刺细胞器官内储存多种毒液蛋白。当刺胞动物遇到来自潜在威胁或猎物动物的化学和物理信号时,刺丝囊被触发并射出类似鱼叉的小管,以穿透猎物并注入毒液。刺丝囊存在于所有刺胞动物中,包括形态简单的粘孢子虫,它们是鱼类和无脊椎动物的一类种类繁多的微观、形成孢子的专性寄生虫。粘孢子虫不是将刺丝囊用于捕食或防御,而是用于附着在宿主上,但毒液在这一过程中的作用尚不清楚。最近的研究表明,相对于自由生活的刺胞动物,一些粘孢子虫的毒液样化合物(VLCs)种类有所减少,然而这些蛋白质的功能尚不清楚。
我们在鲑科鱼类的粘孢子虫寄生虫的刺丝囊蛋白质组和时间序列感染转录组中搜索VLCs。我们使用四种并行方法来检测VLCs:对现有的刺胞动物毒液数据集进行BLAST和HMMER搜索、机器学习工具ToxClassifier以及刺丝囊蛋白质组的结构建模。通过至少三种方法获得阳性评分的序列被视为VLCs。然后,我们绘制它们在鱼类宿主中的时间序列表达图谱,并分析它们与其他有毒动物序列的系统发育相关性。
我们鉴定出8种VLCs,所有这些在其他粘孢子虫数据集中都有密切相关的序列,这表明粘孢子虫具有保守的毒液特征,并且相对于自由生活 的刺胞动物,毒液多样性总体上有所减少。在为期3周的鱼类感染过程中,VLCs的表达差异很大:三个序列在鱼类鳃暴露后一天表达最多;而其他五个VLCs的表达在暴露后21天在肠道中达到峰值,这与带有刺丝囊的成熟寄生虫孢子的形成相吻合。在刺丝囊发育之前的感染早期VLC基因的表达表明,[该粘孢子虫名称未给出]中的毒液已被重新利用,以促进寄生虫在宿主体内的入侵和增殖。分子系统发育学表明,一些VLCs是从刺胞动物祖先遗传而来的,而其他的则与有毒非刺胞动物的序列关系更密切,因此可能通过趋同进化获得了毒液成分的特性。VLCs的存在及其在寄生虫感染过程中的差异表达丰富了“毒液”可能具有的功能概念,并为设计针对粘孢子虫感染的治疗方法提供了靶点。