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5' 区域的桥粒芯蛋白和桥粒斑蛋白基因中的提前终止密码子可能通过翻译重新起始而逃避无义介导的衰变。

Premature Termination Codon in 5' Region of Desmoplakin and Plakoglobin Genes May Escape Nonsense-Mediated Decay through the Reinitiation of Translation.

机构信息

Cardiovascular Genetics Center, IdIBGi, University of Girona, 17190 Girona, Spain.

Centro Investigación Biomédica en Red de Enfermedades Cardiovasculares (CIBERCV), 28029 Madrid, Spain.

出版信息

Int J Mol Sci. 2022 Jan 7;23(2):656. doi: 10.3390/ijms23020656.

Abstract

Arrhythmogenic cardiomyopathy is a heritable heart disease associated with desmosomal mutations, especially premature termination codon (PTC) variants. It is known that PTC triggers the nonsense-mediated decay (NMD) mechanism. It is also accepted that PTC in the last exon escapes NMD; however, the mechanisms involving NMD escaping in 5'-PTC, such as reinitiation of translation, are less known. The main objective of the present study is to evaluate the likelihood that desmosomal genes carrying 5'-PTC will trigger reinitiation. HL1 cell lines were edited by CRISPR/Cas9 to generate isogenic clones carrying 5'-PTC for each of the five desmosomal genes. The genomic context of the ATG in-frame in the 5' region of desmosomal genes was evaluated by in silico predictions. The expression levels of the edited genes were assessed by Western blot and real-time PCR. Our results indicate that the 5'-PTC in and acts as a null allele with no expression, whereas in the and gene, N-truncated protein is expressed. In concordance with this, the genomic context of the 5'-region of and presents an ATG in-frame with an optimal context for the reinitiation of translation. Thus, 5'-PTC triggers NMD in the and genes, whereas it may escape NMD through the reinitiation of the translation in and genes, with no major effects on ACM-related gene expression.

摘要

致心律失常性右室心肌病是一种遗传性心脏病,与桥粒蛋白基因突变相关,尤其是提前终止密码子(PTC)变异。众所周知,PTC 会触发无意义介导的降解(NMD)机制。人们也认为最后一个外显子中的 PTC 会逃避 NMD;然而,关于 5'-PTC 逃避 NMD 的机制,例如翻译重新起始,人们知之甚少。本研究的主要目的是评估携带 5'-PTC 的桥粒蛋白基因是否会触发重新起始。使用 CRISPR/Cas9 对 HL1 细胞系进行编辑,生成每个桥粒蛋白基因都携带 5'-PTC 的同源克隆。通过计算机预测评估桥粒蛋白基因 5' 区域中 ATG 的基因组上下文。通过 Western blot 和实时 PCR 评估编辑基因的表达水平。我们的结果表明, 和 基因中的 5'-PTC 充当无表达的无效等位基因,而在 和 基因中,表达 N 端截断的蛋白。与此一致, 和 基因 5'-区域的基因组上下文具有与翻译重新起始相容的最佳框架 ATG。因此,5'-PTC 在 和 基因中触发 NMD,而在 和 基因中,它可能通过翻译重新起始逃避 NMD,对 ACM 相关基因表达没有重大影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7261/8775493/45af04836505/ijms-23-00656-g001.jpg

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