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编码酵母细胞质天冬氨酰 - tRNA合成酶(APS)的基因的核苷酸序列;天冬氨酰 - tRNA合成酶(AspRS)mRNA 5'和3'末端的定位

Nucleotide sequence of the gene coding for yeast cytoplasmic aspartyl-tRNA synthetase (APS); mapping of the 5' and 3' termini of AspRS mRNA.

作者信息

Sellami M, Fasiolo F, Dirheimer G, Ebel J P, Gangloff J

出版信息

Nucleic Acids Res. 1986 Feb 25;14(4):1657-66. doi: 10.1093/nar/14.4.1657.

DOI:10.1093/nar/14.4.1657
PMID:3513127
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC339550/
Abstract

A 3.8 Kb DNA fragment, which contains the structural gene of aspartyl-tRNA synthetase (AspRS) and its flanking regions, has been fully sequenced by the combined M13/dideoxy chain terminator method. From the single open reading frame of correct length (1671 bp) we deduced an amino acid sequence consistent with that of several peptides of AspRS. No significant internal sequence repeats were observed in the primary structure of the protein. The AspRS gene (APS) has a codon usage pattern typical of non abundant proteins. S1 nuclease analysis of APS mRNA showed a major start 17 bases downstream from a "TATA box" and stops near an RNA polymerase terminator sequence.

摘要

一个包含天冬氨酰 - tRNA合成酶(AspRS)结构基因及其侧翼区域的3.8 Kb DNA片段,已通过M13/双脱氧链终止法组合进行了全序列测定。从正确长度(1671 bp)的单一开放阅读框中,我们推导了与AspRS的几个肽段序列一致的氨基酸序列。在该蛋白质的一级结构中未观察到明显的内部序列重复。AspRS基因(APS)具有非丰富蛋白质典型的密码子使用模式。对APS mRNA的S1核酸酶分析表明,主要起始位点在一个“TATA框”下游17个碱基处,终止于一个RNA聚合酶终止序列附近。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7116/339550/79e432b85b2f/nar00273-0126-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7116/339550/79e432b85b2f/nar00273-0126-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7116/339550/79e432b85b2f/nar00273-0126-a.jpg

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本文引用的文献

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Possible role of flanking nucleotides in recognition of the AUG initiator codon by eukaryotic ribosomes.侧翼核苷酸在真核生物核糖体识别AUG起始密码子中的可能作用。
Nucleic Acids Res. 1981 Oct 24;9(20):5233-52. doi: 10.1093/nar/9.20.5233.
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Codon selection in yeast.酵母中的密码子选择
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Crystallographic studies on the aspartyl-tRNA synthetase-tRNAAsp system from yeast. The crystalline aminoacyl-tRNA synthetase.酵母中天冬氨酰 - tRNA合成酶 - tRNAAsp系统的晶体学研究。结晶的氨酰 - tRNA合成酶。
马链球菌组马疫链球菌组氨酸-tRNA合成酶基因的分子克隆、序列、结构分析及表达
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Role of dimerization in yeast aspartyl-tRNA synthetase and importance of the class II invariant proline.二聚化在酵母天冬氨酰 - tRNA合成酶中的作用以及II类不变脯氨酸的重要性。
Proc Natl Acad Sci U S A. 1993 Nov 15;90(22):10816-20. doi: 10.1073/pnas.90.22.10816.
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J Mol Evol. 1995 May;40(5):499-508. doi: 10.1007/BF00166618.
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Sequence polymorphisms in the yeast gene encoding aspartyl tRNA synthase.编码天冬氨酰tRNA合成酶的酵母基因中的序列多态性。
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7
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8
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