Siller Mario, Stangassinger Lea Maria, Kreutzer Christina, Boor Peter, Bulow Roman D, Kraus Theo J F, von Stillfried Saskia, Wolfl Soraya, Couillard-Despres Sebastien, Oostingh Gertie Janneke, Hittmair Anton, Gadermayr Michael
Department of Information Technology and System Management, Salzburg University of Applied Sciences, Salzburg, Austria.
Department of Biomedical Sciences, Salzburg University of Applied Sciences, Salzburg, Austria.
J Pathol Inform. 2022 Jan 5;13:6. doi: 10.4103/jpi.jpi_53_21. eCollection 2022.
The fast acquisition process of frozen sections allows surgeons to wait for histological findings during the interventions to base intrasurgical decisions on the outcome of the histology. Compared with paraffin sections, however, the quality of frozen sections is often strongly reduced, leading to a lower diagnostic accuracy. Deep neural networks are capable of modifying specific characteristics of digital histological images. Particularly, generative adversarial networks proved to be effective tools to learn about translation between two modalities, based on two unconnected data sets only. The positive effects of such deep learning-based image optimization on computer-aided diagnosis have already been shown. However, since fully automated diagnosis is controversial, the application of enhanced images for visual clinical assessment is currently probably of even higher relevance.
Three different deep learning-based generative adversarial networks were investigated. The methods were used to translate frozen sections into virtual paraffin sections. Overall, 40 frozen sections were processed. For training, 40 further paraffin sections were available. We investigated how pathologists assess the quality of the different image translation approaches and whether experts are able to distinguish between virtual and real digital pathology.
Pathologists' detection accuracy of virtual paraffin sections (from pairs consisting of a frozen and a paraffin section) was between 0.62 and 0.97. Overall, in 59% of images, the virtual section was assessed as more appropriate for a diagnosis. In 53% of images, the deep learning approach was preferred to conventional stain normalization (SN).
Overall, expert assessment indicated slightly improved visual properties of converted images and a high similarity to real paraffin sections. The observed high variability showed clear differences in personal preferences.
冰冻切片的快速获取过程使外科医生在手术过程中能够等待组织学检查结果,以便根据组织学结果做出术中决策。然而,与石蜡切片相比,冰冻切片的质量往往会大幅下降,导致诊断准确性降低。深度神经网络能够改变数字组织学图像的特定特征。特别是,生成对抗网络被证明是仅基于两个不相关数据集来学习两种模式之间转换的有效工具。基于深度学习的图像优化对计算机辅助诊断的积极影响已经得到证实。然而,由于完全自动化诊断存在争议,目前增强图像在视觉临床评估中的应用可能更具相关性。
研究了三种不同的基于深度学习的生成对抗网络。这些方法用于将冰冻切片转换为虚拟石蜡切片。总共处理了40张冰冻切片。用于训练的还有另外40张石蜡切片。我们研究了病理学家如何评估不同图像转换方法的质量,以及专家是否能够区分虚拟数字病理学和真实数字病理学。
病理学家对虚拟石蜡切片(由一张冰冻切片和一张石蜡切片组成的配对)的检测准确率在0.62至0.97之间。总体而言,在59%的图像中,虚拟切片被评估为更适合诊断。在53%的图像中,深度学习方法比传统的染色归一化(SN)更受青睐。
总体而言,专家评估表明转换后的图像视觉特性略有改善,且与真实石蜡切片高度相似。观察到的高变异性表明个人偏好存在明显差异。