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[植物碱基编辑技术:一种用于植物的新型基因组编辑工具]

[Plant prime editing technique: a new genome editing tool for plants].

作者信息

DU Qiuli, Wang Chao, Liu Guanwen, Zhang Dandan, Zhang Shujun, Qiu Jinlong

机构信息

Department of Life Science and Engineering, Jining University, Qufu 273155, Shandong, China.

State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China.

出版信息

Sheng Wu Gong Cheng Xue Bao. 2022 Jan 25;38(1):26-33. doi: 10.13345/j.cjb.210291.

DOI:10.13345/j.cjb.210291
PMID:35142116
Abstract

The CRISPR/Cas9 based prime editing (PE) technique enables all 12 types of base substitutions and precise small DNA deletions or insertions without generating DNA double-strand breaks. Prime editing has been successfully applied in plants and plays important roles in plant precision breeding. Although plant prime editing (PPE) can substantially expand the scope and capabilities of precise genome editing in plants, its editing efficiency still needs to be further improved. Here, we review the development of PPE technique, and introduce structural composition, advantages and limitations of PPE. Strategies to improve the PPE editing efficiency, including the -directed PBS length design, the RT template length, the dual-pegRNA strategy, the PlantPegDesigner website, and the strategies for optimizing the target proteins of PPE, were highlighted. Finally, the prospects of future development and application of PPE were discussed.

摘要

基于CRISPR/Cas9的引导编辑(PE)技术能够实现所有12种类型的碱基替换以及精确的小片段DNA缺失或插入,而不会产生DNA双链断裂。引导编辑已在植物中成功应用,并在植物精准育种中发挥重要作用。尽管植物引导编辑(PPE)能够大幅扩展植物精确基因组编辑的范围和能力,但其编辑效率仍需进一步提高。在此,我们综述了PPE技术的发展,并介绍了PPE的结构组成、优点和局限性。重点介绍了提高PPE编辑效率的策略,包括定向PBS长度设计、RT模板长度、双pegRNA策略、PlantPegDesigner网站以及优化PPE靶蛋白的策略。最后,讨论了PPE未来发展和应用的前景。

相似文献

1
[Plant prime editing technique: a new genome editing tool for plants].[植物碱基编辑技术:一种用于植物的新型基因组编辑工具]
Sheng Wu Gong Cheng Xue Bao. 2022 Jan 25;38(1):26-33. doi: 10.13345/j.cjb.210291.
2
Prime editing: Its systematic optimization and current applications in disease treatment and agricultural breeding.碱基编辑:系统优化及其在疾病治疗和农业育种中的应用。
Int J Biol Macromol. 2023 Dec 31;253(Pt 4):127025. doi: 10.1016/j.ijbiomac.2023.127025. Epub 2023 Sep 26.
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Optimized prime editing in monocot plants using PlantPegDesigner and engineered plant prime editors (ePPEs).利用 PlantPegDesigner 和工程化植物引物编辑器(ePPEs)优化单子叶植物中的引物编辑。
Nat Protoc. 2023 Mar;18(3):831-853. doi: 10.1038/s41596-022-00773-9. Epub 2022 Nov 25.
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[Prime editing creates a novel dimension of plant precise genome editing].[碱基编辑开创了植物精确基因组编辑的新维度]
Yi Chuan. 2020 Jun 20;42(6):519-523. doi: 10.16288/j.yczz.20-125.
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Int J Mol Sci. 2022 Aug 29;23(17):9809. doi: 10.3390/ijms23179809.
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Precision genome editing in plants using gene targeting and prime editing: existing and emerging strategies.利用基因靶向和引导编辑在植物中进行精准基因组编辑:现有策略与新兴策略
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Improvement of base editors and prime editors advances precision genome engineering in plants.碱基编辑器和先导编辑器的改进推动了植物的精确基因组工程。
Plant Physiol. 2022 Mar 28;188(4):1795-1810. doi: 10.1093/plphys/kiab591.
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Prime Editing in the model plant Physcomitrium patens and its potential in the tetraploid potato.在模式植物拟南芥中进行的 Prime 编辑及其在四倍体马铃薯中的应用。
Plant Sci. 2022 Mar;316:111162. doi: 10.1016/j.plantsci.2021.111162. Epub 2021 Dec 22.
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Introduction of mutations in plants with prime editing.引入具有主导编辑功能的植物突变。
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Prime editing in plants and mammalian cells: Mechanism, achievements, limitations, and future prospects.植物和哺乳动物细胞中的 Prime 编辑:机制、成就、限制和未来前景。
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