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水与FeNiP磷铁镍矿(110)表面的相互作用:量子力学原子视角

Water Interaction with FeNiP Schreibersite (110) Surface: a Quantum Mechanical Atomistic Perspective.

作者信息

Pantaleone Stefano, Corno Marta, Rimola Albert, Balucani Nadia, Ugliengo Piero

机构信息

Dipartimento di Chimica and Nanostructured Interfaces and Surfaces (NIS) Centre, Università degli Studi di Torino, via P. Giuria 7, I-10125, Torino, Italy.

Dipartimento di Chimica, Biologia e Biotecnologie, Università degli Studi di Perugia, Via Elce di Sotto 8, I-06123 Perugia, Italy.

出版信息

J Phys Chem C Nanomater Interfaces. 2022 Feb 3;126(4):2243-2252. doi: 10.1021/acs.jpcc.1c09947. Epub 2022 Jan 25.

DOI:10.1021/acs.jpcc.1c09947
PMID:35145576
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8819687/
Abstract

Phosphorus is an element of primary importance for all living creatures, being present in many biological activities in the form of phosphate (PO ). However, there are still open questions about the origin of this specific element and on the transformation that allowed it to be incorporated in biological systems. The most probable source of prebiotic phosphorus is the intense meteoritic bombardment during the Archean era, a few million years after the solar system formation, which brought tons of iron-phosphide materials (schreibersite) on the early Earth crust. It was recently demonstrated that by simple wetting/corrosion processes from this material, various oxygenated phosphorus compounds are produced. In the present work, the wetting process of schreibersite (FeNiP) was studied by computer simulations using density functional theory, with the PBE functional supplemented with dispersive interactions through a posteriori empirical correction. To start disentangling the complexity of the system, only the most stable (110) surface of FeNiP was used simulating different water coverages, from which structures, water binding energies, and vibrational spectra have been predicted. The computed (ana-)harmonic infrared spectra have been compared with the experimental ones, thus, confirming the validity of the adopted methodology and models.

摘要

磷是所有生物至关重要的元素,以磷酸盐(PO)的形式存在于许多生物活动中。然而,关于这种特定元素的起源以及使其融入生物系统的转化过程,仍然存在一些未解决的问题。益生元磷最可能的来源是太古代时期强烈的陨石撞击,即太阳系形成后的几百万年,这将数吨磷化铁物质(磷铁镍矿)带到了早期地壳上。最近有研究表明,通过这种物质的简单润湿/腐蚀过程,可以产生各种氧化磷化合物。在本工作中,利用密度泛函理论通过计算机模拟研究了磷铁镍矿(FeNiP)的润湿过程,采用PBE泛函并通过后验经验校正补充色散相互作用。为了开始理清系统的复杂性,仅使用FeNiP最稳定的(110)表面模拟不同的水覆盖率,据此预测了结构、水结合能和振动光谱。将计算得到的(非)谐红外光谱与实验光谱进行了比较,从而证实了所采用方法和模型的有效性。

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引用本文的文献

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Computational Study on the Water Corrosion Process at Schreibersite (FeNiP) Surfaces: from Phosphide to Phosphates.磷铁镍矿(FeNiP)表面水腐蚀过程的计算研究:从磷化物到磷酸盐
ACS Earth Space Chem. 2023 Sep 21;7(10):2050-2061. doi: 10.1021/acsearthspacechem.3c00167. eCollection 2023 Oct 19.

本文引用的文献

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The evolution of the surface of the mineral schreibersite in prebiotic chemistry.矿物磷铁镍矿表面在生命起源前化学中的演变。
Phys Chem Chem Phys. 2016 Jul 27;18(30):20160-7. doi: 10.1039/c6cp00836d.
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Nucleoside phosphorylation by the mineral schreibersite.矿物磷铁镍矿对核苷的磷酸化作用。
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Evidence for reactive reduced phosphorus species in the early Archean ocean.早期太古宙海洋中活性还原态磷物种的证据。
Proc Natl Acad Sci U S A. 2013 Jun 18;110(25):10089-94. doi: 10.1073/pnas.1303904110. Epub 2013 Jun 3.
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