Beijing Key Laboratory for Separation and Analysis in Biomedicine and Pharmaceuticals, School of Life Sciences, Beijing Institute of Technology, Beijing 100081, China.
Department of Pharmacy, Abbottabad Campus, COMSATS University Islamabad, Abbottabad 22060, Pakistan.
Int J Mol Sci. 2022 Jan 24;23(3):1294. doi: 10.3390/ijms23031294.
Major depressive disorder (MDD) is a neuropsychiatric disorder, which remains challenging to diagnose and manage due to its complex endophenotype. In this aspect, circulatory microRNAs (cimiRNAs) offer great potential as biomarkers and may provide new insights for MDD diagnosis. Therefore, we systemically reviewed the literature to explore various cimiRNAs contributing to MDD diagnosis and underlying molecular pathways. A comprehensive literature survey was conducted, employing four databases from 2012 to January 2021. Out of 1004 records, 157 reports were accessed for eligibility criteria, and 32 reports meeting our inclusion criteria were considered for in-silico analysis. This study identified 99 dysregulated cimiRNAs in MDD patients, out of which 20 cimiRNAs found in multiple reports were selected for in-silico analysis. KEGG pathway analysis indicated activation of ALS, MAPK, p53, and P13K-Akt signaling pathways, while gene ontology analysis demonstrated that most protein targets were associated with transcription. In addition, chromosomal location analysis showed clustering of dysregulated cimiRNAs at proximity 3p22-p21, 9q22.32, and 17q11.2, proposing their coregulation with specific transcription factors primarily involved in MDD physiology. Further analysis of transcription factor sites revealed the existence of HIF-1, REST, and TAL1 in most cimiRNAs. These transcription factors are proposed to target genes linked with MDD, hypothesizing that first-wave cimiRNA dysregulation may trigger the second wave of transcription-wide changes, altering the protein expressions of MDD-affected cells. Overall, this systematic review presented a list of dysregulated cimiRNAs in MDD, notably miR-24-3p, let 7a-5p, miR-26a-5p, miR135a, miR-425-3p, miR-132, miR-124 and miR-16-5p as the most prominent cimiRNAs. However, various constraints did not permit us to make firm conclusions on the clinical significance of these cimiRNAs, suggesting the need for more research on single blood compartment to identify the biomarker potential of consistently dysregulated cimiRNAs in MDD, as well as the therapeutic implications of these in-silico insights.
重度抑郁症(MDD)是一种神经精神疾病,由于其复杂的表型,其诊断和管理仍然具有挑战性。在这方面,循环 microRNAs(cimiRNAs)作为生物标志物具有很大的潜力,并可能为 MDD 的诊断提供新的见解。因此,我们系统地回顾了文献,以探索有助于 MDD 诊断的各种 cimiRNAs 及其潜在的分子途径。我们进行了全面的文献调查,使用了 2012 年至 2021 年 1 月的四个数据库。在 1004 条记录中,有 157 条记录符合资格标准,并对符合纳入标准的 32 条记录进行了计算机分析。本研究确定了 99 个在 MDD 患者中失调的 cimiRNAs,其中 20 个在多个报告中发现的 cimiRNAs 被选择进行计算机分析。KEGG 途径分析表明 ALS、MAPK、p53 和 P13K-Akt 信号通路被激活,而基因本体论分析表明,大多数蛋白质靶标与转录有关。此外,染色体位置分析表明,失调的 cimiRNAs 在 3p22-p21、9q22.32 和 17q11.2 附近聚集,表明它们与主要参与 MDD 生理学的特定转录因子共同调节。对转录因子位点的进一步分析表明,大多数 cimiRNAs 中存在 HIF-1、REST 和 TAL1。这些转录因子可能靶向与 MDD 相关的基因,假设第一波 cimiRNA 失调可能引发转录范围广泛变化的第二波,改变受 MDD 影响的细胞的蛋白质表达。总的来说,本系统综述列出了 MDD 中失调的 cimiRNAs,其中 miR-24-3p、let 7a-5p、miR-26a-5p、miR135a、miR-425-3p、miR-132、miR-124 和 miR-16-5p 是最突出的 cimiRNAs。然而,由于存在各种限制,我们无法就这些 cimiRNAs 的临床意义得出明确的结论,这表明需要对单一血液成分进行更多的研究,以确定 MDD 中一致失调的 cimiRNAs 的生物标志物潜力,以及这些计算机分析见解的治疗意义。