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墨西哥韦拉克鲁斯中部地区土著社区管理的克里奥尔羊的遗传多样性

Genetic Diversity of Creole Sheep Managed by Indigenous Communities of the Central Region of Veracruz, Mexico.

作者信息

Castillo-Rodríguez Ruth Guadalupe, Segura-León Obdulia Lourdes, Hernández-Rodríguez Martha, Serna-Lagunes Ricardo, Salinas-Ruiz Josafhat, Salazar-Ortiz Juan

机构信息

Maestría en Innovación Agroalimentaria Sustentable, Colegio de Posgraduados, Campus Córdoba, Veracruz 94953, Mexico.

Colegio de Posgraduados, Campus Montecillo, Texcoco 56230, Mexico.

出版信息

Animals (Basel). 2022 Feb 13;12(4):456. doi: 10.3390/ani12040456.

Abstract

In the indigenous communities of central Veracruz, herds of creole sheep have been established and managed through traditional practices of crossing, but their genetic characteristics have never been examined in order to evaluate their state of endogamy, and to help the management programs to protect this genetic resource. The objective of the present study was to characterize the genetic diversity of three populations of creole sheep managed by indigenous communities in the central region of Veracruz, Mexico. Indigenous family producers of creole sheep were located and blood samples taken from 90 individual sheep from the municipalities of Tehuipango, Astacinga and Tlaquilpa, Veracruz. In the laboratory, the genomic DNA was extracted and genetic diversity characterized using four microsatellites (ILSTS11, ILSTS5, SRCRSP9 and OarFCB128) amplified by PCR and visualized on polyacrylamide gels. The four microsatellites were highly informative (PIC = 85%) and presented values of 0.6 to 0.81 of heterozygosity, with an average number of 16 alleles. According to the Hardy-Weinberg equilibrium model, three of the loci were not significant ( < 0.05), presumably this means that they do not deviate significantly from H-W predictions and there was slight genetic differentiation ( = 0.025), along with a slight decrease in homozygotes ( = -0.021). According to the analysis of variance, 99% of the total variation was hosted at the individual level. It is concluded that the three creole sheep populations still present genetic diversity at the four loci and non-random pairings have occurred.

摘要

在韦拉克鲁斯中部的土著社区,已经通过传统的杂交方式建立并管理了克里奥尔羊种群,但从未对其遗传特征进行过检测,以评估其近亲繁殖状况,并协助管理计划保护这一遗传资源。本研究的目的是对墨西哥韦拉克鲁斯中部地区由土著社区管理的三个克里奥尔羊种群的遗传多样性进行特征描述。找到了克里奥尔羊的土著家庭养殖户,并从韦拉克鲁斯州特惠潘戈、阿斯塔辛加和特拉基尔帕市的90只个体羊身上采集了血样。在实验室中,提取了基因组DNA,并使用通过聚合酶链反应(PCR)扩增并在聚丙烯酰胺凝胶上可视化的四个微卫星(ILSTS11、ILSTS5、SRCRSP9和OarFCB128)对遗传多样性进行了特征描述。这四个微卫星具有高度信息性(多态信息含量=85%),杂合度值在0.6至0.81之间,平均等位基因数为16个。根据哈迪-温伯格平衡模型,其中三个位点不显著(<0.05),推测这意味着它们与哈迪-温伯格预测没有显著偏差,存在轻微的遗传分化(=0.025),同时纯合子略有减少(=-0.021)。根据方差分析,99%的总变异存在于个体水平。得出的结论是,这三个克里奥尔羊种群在这四个位点上仍然存在遗传多样性,并且发生了非随机配对。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7a8d/8868423/ed85fbac8b1b/animals-12-00456-g001.jpg

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