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使用分子方法检测耐甲氧西林感染

Detection of Methicillin-Resistant Infections Using Molecular Methods.

作者信息

Tenover Fred C, Tickler Isabella A

机构信息

Cepheid, Sunnyvale, CA 94089, USA.

出版信息

Antibiotics (Basel). 2022 Feb 12;11(2):239. doi: 10.3390/antibiotics11020239.

DOI:10.3390/antibiotics11020239
PMID:35203841
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8868555/
Abstract

The application of molecular detection methods for bacterial pathogens has dramatically improved the outcomes of septic patients, including those with methicillin-resistant (MRSA) infections. Molecular methods can be applied to a variety of clinical specimens including nasal swabs, growth in blood culture bottles, and wounds. While data show that the overall accuracy of molecular tests for MRSA is high, results can be confounded by the presence of multiple staphylococcal species in a specimen, insertions and deletions of DNA in and around the Staphylococcal Cassette Chromosome (SCC) element, and point mutations in . Herein, we explore the complexities of molecular approaches to MRSA detection and the instances where phenotypic methods should be pursued to resolve discrepancies between genotypic and phenotypic results.

摘要

用于检测细菌病原体的分子检测方法的应用显著改善了脓毒症患者的治疗结果,包括耐甲氧西林金黄色葡萄球菌(MRSA)感染患者。分子方法可应用于多种临床标本,包括鼻拭子、血培养瓶中的培养物以及伤口。虽然数据表明MRSA分子检测的总体准确性很高,但标本中多种葡萄球菌物种的存在、葡萄球菌盒式染色体(SCC)元件及其周围DNA的插入和缺失以及[此处原文缺失部分内容]中的点突变可能会混淆结果。在此,我们探讨了MRSA检测分子方法的复杂性,以及在哪些情况下应采用表型方法来解决基因型和表型结果之间的差异。

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Detection of Methicillin-Resistant Infections Using Molecular Methods.使用分子方法检测耐甲氧西林感染
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Detection of staphylococcal cassette chromosome mec-associated DNA segments in multiresistant methicillin-susceptible Staphylococcus aureus (MSSA) and identification of Staphylococcus epidermidis ccrAB4 in both methicillin-resistant S. aureus and MSSA.在多重耐药的甲氧西林敏感金黄色葡萄球菌(MSSA)中检测葡萄球菌盒式染色体mec相关DNA片段,并在耐甲氧西林金黄色葡萄球菌和MSSA中鉴定表皮葡萄球菌ccrAB4。
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Community-acquired methicillin-resistant Staphylococcus aureus from skin and soft tissue infections (in a sample of Egyptian population): analysis of mec gene and staphylococcal cassette chromosome.社区获得性耐甲氧西林金黄色葡萄球菌皮肤软组织感染(埃及人群样本):mec 基因和葡萄球菌盒式染色体分析。
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本文引用的文献

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The Applications of Nanopore Sequencing Technology in Pathogenic Microorganism Detection.纳米孔测序技术在病原微生物检测中的应用
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Emerging Options for the Diagnosis of Bacterial Infections and the Characterization of Antimicrobial Resistance.新兴的细菌感染诊断选项和抗菌药物耐药性特征。
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The Genotype-to-Phenotype Dilemma: How Should Laboratories Approach Discordant Susceptibility Results?基因型到表型的困境:实验室应如何处理不一致的易感性结果?
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Mobile genetic elements responsible for discordant Staphylococcus aureus phenotypes and genotypes in the same blood culture bottle.同一血培养瓶中导致金黄色葡萄球菌表型和基因型不一致的移动遗传元件。
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Rapid identification of pathogens, antibiotic resistance genes and plasmids in blood cultures by nanopore sequencing.纳米孔测序快速鉴定血培养中的病原体、抗生素耐药基因和质粒。
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Practical Guidance for Clinical Microbiology Laboratories: A Comprehensive Update on the Problem of Blood Culture Contamination and a Discussion of Methods for Addressing the Problem.临床微生物学实验室实用指南:血液培养污染问题的全面更新及解决方法讨论。
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Diagnosis and Treatment of Adults with Community-acquired Pneumonia. An Official Clinical Practice Guideline of the American Thoracic Society and Infectious Diseases Society of America.成人社区获得性肺炎诊断和治疗。美国胸科学会和美国传染病学会的官方临床实践指南。
Am J Respir Crit Care Med. 2019 Oct 1;200(7):e45-e67. doi: 10.1164/rccm.201908-1581ST.
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