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鱼类宿主对神经坏死病毒反应的转录组分析

Transcriptomic Analysis of Fish Hosts Responses to Nervous Necrosis Virus.

作者信息

Toubanaki Dimitra K, Efstathiou Antonia, Karagouni Evdokia

机构信息

Immunology of Infection Group, Department of Microbiology, Hellenic Pasteur Institute, 11521 Athens, Greece.

出版信息

Pathogens. 2022 Feb 3;11(2):201. doi: 10.3390/pathogens11020201.

Abstract

Nervous necrosis virus (NNV) has been responsible for mass mortalities in the aquaculture industry worldwide, with great economic and environmental impact. The present review aims to summarize the current knowledge of gene expression responses to nervous necrosis virus infection in different fish species based on transcriptomic analysis data. Four electronic databases, including PubMed, Web of Science, and SCOPUS were searched, and more than 500 publications on the subject were identified. Following the application of the appropriate testing, a total of 24 articles proved eligible for this review. NNV infection of different host species, in different developmental stages and tissues, presented in the eligible publications, are described in detail, revealing and highlighting genes and pathways that are most affected by the viral infection. Those transcriptome studies of NNV infected fish are oriented in elucidating the roles of genes/biomarkers for functions of special interest, depending on each study's specific emphasis. This review presents a first attempt to provide an overview of universal host reaction mechanisms to viral infections, which will provide us with new perspectives to overcome NNV infection to build healthier and sustainable aquaculture systems.

摘要

神经坏死病毒(NNV)已导致全球水产养殖业大量死亡,造成了巨大的经济和环境影响。本综述旨在基于转录组分析数据,总结目前不同鱼类物种对神经坏死病毒感染的基因表达反应的相关知识。检索了包括PubMed、科学网和Scopus在内的四个电子数据库,共识别出500多篇关于该主题的出版物。经过适当筛选,共有24篇文章符合本综述的要求。符合要求的出版物详细描述了不同宿主物种、不同发育阶段和组织中的NNV感染情况,揭示并突出了受病毒感染影响最大的基因和信号通路。这些对感染NNV的鱼类的转录组研究旨在阐明特定感兴趣功能的基因/生物标志物的作用,具体取决于每项研究的特定重点。本综述首次尝试概述宿主对病毒感染的普遍反应机制,这将为我们克服NNV感染、构建更健康和可持续的水产养殖系统提供新的视角。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4793/8875540/5ce3c6dbebf2/pathogens-11-00201-g001.jpg

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