Zhang Zhijing, Hu Xinglin, Qiu Dan, Sun Yuchen, Lei Lei
Department of Histology and Embryology, Harbin Medical University, Harbin, Heilongjiang Province, China.
J Oncol. 2022 Feb 18;2022:8402568. doi: 10.1155/2022/8402568. eCollection 2022.
Necroptosis is a new regulated cell-death mechanism that plays a critical role in various cancers. However, few studies have considered necroptosis-related genes (NRGs) as prognostic indexes for cancer. As one of the most common cancers in the world, head and neck squamous cell carcinoma (HNSCC) lacks effective diagnostic strategies at present. Hence, a series of novel prognostic indexes are required to support clinical diagnosis. Recently, many studies have confirmed that necroptosis was a key regulated mechanism in HNSCC, but no systematic study has ever studied the correlation between necroptosis-related signatures and the prognosis of HNSCC. Thus, in the current study, we aimed to construct a risk model of necroptosis-related signatures for HNSCC. We acquired 159 NRGs from the Kyoto Encyclopedia of Genes and Genomes (KEGG) and compared them with samples of normal tissue downloaded from The Cancer Genome Atlas (TCGA), ultimately screening 38 differentially expressed NRGs (DE-NRGs). Then, by Cox regression analysis, we successfully identified 7 NRGs as prognostic factors. We next separated patients into high- and low-risk groups via the prognostic model consisting of 7 NRGs. Individuals in the high-risk group had much shorter overall survival (OS) times than their counterparts. Furthermore, using Cox regression analysis, we confirmed the necroptosis-related prognostic model to be an independent prognostic factor for HNSCC. Receiver operating characteristic (ROC) curve analysis proved the predictive ability of this model. Finally, Gene Expression Omnibus (GEO) data sets (GSE65858, GSE4163) were used as independent databases to verify the model's predictive ability, and similar results obtained from two data sets confirmed our conclusion. Collectively, in this study, we first referred to necroptosis-related signatures as an independent prognostic model for cancer via bioinformatics measures, and the necroptosis-related prognostic model we constructed could precisely forecast the OS time of patients with HNSCC. Utilizing the model may significantly improve the diagnostic rate and provide a series of new targets for treatment in the future.
坏死性凋亡是一种新的程序性细胞死亡机制,在多种癌症中起关键作用。然而,很少有研究将坏死性凋亡相关基因(NRGs)视为癌症的预后指标。作为世界上最常见的癌症之一,头颈部鳞状细胞癌(HNSCC)目前缺乏有效的诊断策略。因此,需要一系列新的预后指标来支持临床诊断。最近,许多研究证实坏死性凋亡是HNSCC中的关键调控机制,但尚无系统研究探讨坏死性凋亡相关特征与HNSCC预后之间的相关性。因此,在本研究中,我们旨在构建HNSCC的坏死性凋亡相关特征风险模型。我们从京都基因与基因组百科全书(KEGG)中获取了159个NRGs,并将它们与从癌症基因组图谱(TCGA)下载的正常组织样本进行比较,最终筛选出38个差异表达的NRGs(DE-NRGs)。然后,通过Cox回归分析,我们成功鉴定出7个NRGs作为预后因素。接下来,我们通过由7个NRGs组成的预后模型将患者分为高风险组和低风险组。高风险组个体的总生存期(OS)明显短于低风险组个体。此外,通过Cox回归分析,我们证实坏死性凋亡相关预后模型是HNSCC的独立预后因素。受试者工作特征(ROC)曲线分析证明了该模型的预测能力。最后,利用基因表达综合数据库(GEO)数据集(GSE65858、GSE4163)作为独立数据库来验证模型的预测能力,两个数据集得到的相似结果证实了我们的结论。总体而言,在本研究中,我们首先通过生物信息学方法将坏死性凋亡相关特征作为癌症的独立预后模型,我们构建的坏死性凋亡相关预后模型能够准确预测HNSCC患者的OS时间。利用该模型可能会显著提高诊断率,并为未来的治疗提供一系列新靶点。