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患有慢性腰痛的黑人和白人个体之间的DNA甲基化差异丰富了不同的基因组途径。

Differential DNA methylation in Black and White individuals with chronic low back pain enrich different genomic pathways.

作者信息

Aroke Edwin N, Jackson Pamela, Meng Lingsong, Huo Zhiguang, Overstreet Demario S, Penn Terence M, Quinn Tammie L, Cruz-Almeida Yenisel, Goodin Burel R

机构信息

School of Nursing, University of Alabama at Birmingham, Birmingham, AL, USA.

Department of Biostatistics, University of Florida, Gainesville, FL, USA.

出版信息

Neurobiol Pain. 2022 Feb 25;11:100086. doi: 10.1016/j.ynpai.2022.100086. eCollection 2022 Jan-Jul.

Abstract

UNLABELLED

Compared to Non-Hispanic Whites (NHWs), individuals who self-identify as Non-Hispanic Blacks (NHBs) in the United States experience more severe and disabling chronic low back pain (cLBP). We hypothesized that differences in DNA methylation (DNAm) play a role in racial disparities in cLBP.

PURPOSE

To determine the relationship between DNAm levels and racial group differences in adults with cLBP. Our study's secondary purpose was to perform a race-stratified comparison of adults with cLBP and pain-free controls and identify functional genomic pathways enriched by annotated differentially methylated genes.

PATIENTS AND METHODS

We recruited 49 NHBs and 49 NHWs (49 cLBP and 49 pain-free controls, PFCs), analyzed DNAm from whole blood using reduced representation bisulfite sequencing, and identified enriched genomic pathways.

RESULTS

Among participants with cLBP, we identified 2873 differentially methylated loci (DML; methylation differences of at least 10% and p < 0.0001), many of which were annotated to genes of importance to pain pathology. These DMLs significantly enriched pathways to involved in nociception/pain processing (, , ) and neuronal differentiation (e.g., , and ). Our race stratified analyses of individuals with cLBP versus PFCs revealed 2356 DMLs in NHBs and 772 DMLs in NHWs with p < 0.0001 and > 10% methylation difference. Ingenuity Pathway Analysis revealed that many pathways of significance to pain such as and , were more significant in NHBs than NHWs.

CONCLUSION

Even though an individual's self-identified race is a social construct, not a biological variable, racism associated with that classification affects virtually every aspect of life, including disease risk. DNAm induced alterations in stress signaling pathways may explain worse pain outcomes in NHBs.

摘要

未标注

与非西班牙裔白人(NHW)相比,在美国自我认定为非西班牙裔黑人(NHB)的个体经历更严重且致残的慢性腰痛(cLBP)。我们假设DNA甲基化(DNAm)差异在cLBP的种族差异中起作用。

目的

确定cLBP成人中DNAm水平与种族群体差异之间的关系。我们研究的次要目的是对cLBP成人与无疼痛对照进行种族分层比较,并识别经注释的差异甲基化基因富集的功能基因组途径。

患者与方法

我们招募了49名NHB和49名NHW(49名cLBP患者和49名无疼痛对照,PFC),使用简化代表性亚硫酸氢盐测序分析全血中的DNAm,并识别富集的基因组途径。

结果

在患有cLBP的参与者中,我们鉴定出2873个差异甲基化位点(DML;甲基化差异至少为10%且p < 0.0001),其中许多位点被注释到对疼痛病理学重要的基因。这些DML显著富集了参与伤害感受/疼痛处理(例如……)和神经元分化(例如……)的途径。我们对cLBP患者与PFC进行的种族分层分析显示,NHB中有2356个DML,NHW中有772个DML,p < 0.0001且甲基化差异> 10%。通路分析表明,许多对疼痛有重要意义的途径,如……,在NHB中比在NHW中更显著。

结论

尽管个体自我认定的种族是一种社会建构,而非生物学变量,但与该分类相关的种族主义实际上影响生活的方方面面,包括疾病风险。DNAm诱导的应激信号通路改变可能解释了NHB中更差的疼痛结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8318/8885563/21b6b01c7a4a/gr1.jpg

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