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冻存对感染用于 CRISPR/Cas9 介导的水通道蛋白-8 敲除的慢病毒载体的 A172 和 U251 神经胶质瘤细胞的影响。

Effect of cryopreservation on A172 and U251 glioma cells infected with lentiviral vectors designed for CRISPR/Cas9-mediated aquaporin-8 knock-out.

机构信息

Department of Human Anatomy, College of Basic Medicine, Chongqing Medical University, Chongqing, China.

Department of Forensic Medicine, Chongqing Medical University, Chongqing, China.

出版信息

PLoS One. 2022 Mar 4;17(3):e0263162. doi: 10.1371/journal.pone.0263162. eCollection 2022.

Abstract

Among the three existing targeted gene editing technologies, zinc-finger nucleases, transcription activator-like effector nucleases, and clustered regularly interspaced short palindromic repeats-CRISPR-associated 9 (CRISPR-Cas9), the latter is widely used owing to its simplicity, efficiency, and low cost. Here, we routinely infected A172 and U251 cells with lentiviral vectors, in which aquaporin-8 (AQP8) was knocked out using CRISPR/Cas9. Our results indicated that cryopreservation did not significantly alter the viral infection efficiency, but influenced AQP8 expression in the infected cells at both protein and mRNA levels compared with the non-cryopreserved samples. Further, AQP8 expression at protein and mRNA levels in recovered cryopreserved infected cells did not significantly differ from those in the blank and negative controls, indicating that the lentivirus was still infectious at low temperatures. However, it failed to release the AQP8-targeting guide RNA in the infected cells, or the guide RNA was released, but underwent changes that caused it to malfunction in the cells with CRISPR/Cas9-mediated AQP8 knock-out. Our findings possibly provide some insights into the reliability of lentiviruses as CRISPR/Cas9 vectors.

摘要

在现有的三种靶向基因编辑技术中,锌指核酸酶、转录激活因子样效应物核酸酶和成簇规律间隔短回文重复序列- CRISPR 相关 9 (CRISPR-Cas9),由于其简单、高效和低成本,后者被广泛应用。在这里,我们常规地用慢病毒载体感染 A172 和 U251 细胞,利用 CRISPR/Cas9 敲除水通道蛋白 8(AQP8)。结果表明,与非冻存样本相比,冻存对病毒感染效率没有显著影响,但在蛋白和 mRNA 水平上影响了感染细胞中 AQP8 的表达。此外,在恢复的冻存感染细胞中,AQP8 在蛋白和 mRNA 水平上的表达与空白和阴性对照组没有显著差异,这表明在低温下,慢病毒仍然具有感染性。然而,它未能在感染细胞中释放靶向 AQP8 的向导 RNA,或者向导 RNA 被释放,但发生了变化,导致其在 CRISPR/Cas9 介导的 AQP8 敲除的细胞中功能失常。我们的发现可能为慢病毒作为 CRISPR/Cas9 载体的可靠性提供了一些见解。

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