Sikandar Asfandyar, Lopatniuk Maria, Luzhetskyy Andriy, Müller Rolf, Koehnke Jesko
Department of Microbial Natural Products (MINS), Helmholtz Institute for Pharmaceutical Research Saarland (HIPS), Helmholtz Center for Infection Research (HZI) and Department of Pharmacy at Saarland University (UdS), Campus E8.1, 66123 Saarbrücken, Germany.
Department of Pharmacy, Pharmaceutical Biotechnology, Saarland University, 66123 Saarbrücken, Germany.
J Am Chem Soc. 2022 Mar 23;144(11):5136-5144. doi: 10.1021/jacs.2c00402. Epub 2022 Mar 9.
Thioholgamides are ribosomally synthesized and posttranslationally modified peptides (RiPPs), with potent activity against cancerous cell lines and an unprecedented structure. Despite being one of the most structurally and chemically complex RiPPs, very few biosynthetic steps have been elucidated. Here, we report the complete reconstitution of the biosynthetic pathway. We demonstrate that thioamidation is the first step and acts as a gatekeeper for downstream processing. Thr dehydration follows thioamidation, and our studies reveal that both these modifications require the formation of protein complexes─ThoH/I and ThoC/D. Harnessing the power of AlphaFold, we deduce that ThoD acts as a lyase and also proposes putative catalytic residues. ThoF catalyzes the oxidative decarboxylation of the terminal Cys, and the subsequent macrocyclization is facilitated by ThoE. This is followed by Ser dehydration, which is also carried out by ThoC/D. ThoG is responsible for histidine bis--methylation, which is a prerequisite for His β-hydroxylation─a modification carried out by ThoJ. The last step of the pathway is the removal of the leader peptide by ThoK to afford mature thioholgamide.
硫醇酰胺是核糖体合成并经翻译后修饰的肽(RiPPs),对癌细胞系具有强大活性且结构前所未见。尽管是结构和化学上最复杂的RiPPs之一,但已阐明的生物合成步骤却很少。在此,我们报道了生物合成途径的完整重建。我们证明硫酰胺化是第一步,并且作为下游加工的守门人。硫酰胺化之后是苏氨酸脱水,我们的研究表明这两种修饰都需要形成蛋白质复合物——ThoH/I和ThoC/D。利用AlphaFold的强大功能,我们推断ThoD作为裂解酶并提出了推定的催化残基。ThoF催化末端半胱氨酸的氧化脱羧,随后的大环化由ThoE促进。接下来是丝氨酸脱水,这也由ThoC/D进行。ThoG负责组氨酸双甲基化,这是Hisβ-羟基化的先决条件——Hisβ-羟基化是由ThoJ进行的修饰。该途径的最后一步是由ThoK去除前导肽以得到成熟的硫醇酰胺。