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肿瘤治疗中的新拼接表位:一个失败的案例?

Neo-Splicetopes in Tumor Therapy: A Lost Case?

机构信息

Charité - Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Institute of Biochemistry, Berlin, Germany.

出版信息

Front Immunol. 2022 Feb 21;13:849863. doi: 10.3389/fimmu.2022.849863. eCollection 2022.

DOI:10.3389/fimmu.2022.849863
PMID:35265089
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8898901/
Abstract

Proteasome generates spliced peptides by ligating two distant cleavage products in a reverse proteolysis reaction. The observation that CD8+ T cells recognizing a spliced peptide induced T cell rejection in a melanoma patient following adoptive T cell transfer (ATT), raised some hopes with regard to the general therapeutic and immune relevance of spliced peptides. Concomitantly, the identification of spliced peptides was also the start of a controversy with respect to their frequency, abundancy and their therapeutic applicability. Here I review some of the recent evidence favoring or disfavoring an immune relevance of splicetopes and discuss from a theoretical point of view the potential usefulness of tumor specific splicetopes and why against all odds it still may seem worth trying to identify such tumor and patient-specific neosplicetopes for application in ATT.

摘要

蛋白酶体通过在反向蛋白水解反应中连接两个遥远的切割产物来产生剪接肽。观察到,在接受过继性 T 细胞转移(ATT)后,识别剪接肽的 CD8+T 细胞会引发黑色素瘤患者的 T 细胞排斥反应,这给人们带来了一些希望,即剪接肽具有普遍的治疗和免疫相关性。同时,剪接肽的鉴定也是一个有争议的问题,涉及到它们的频率、丰度及其治疗适用性。在这里,我回顾了一些最近的证据,这些证据支持或不支持剪接表位的免疫相关性,并从理论角度讨论了肿瘤特异性剪接表位的潜在有用性,以及尽管存在各种困难,但尝试鉴定这种肿瘤和患者特异性的新剪接表位并将其应用于 ATT 仍然可能是值得的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49ef/8898901/f1814894f34c/fimmu-13-849863-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49ef/8898901/f1814894f34c/fimmu-13-849863-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/49ef/8898901/f1814894f34c/fimmu-13-849863-g001.jpg

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Proteasomes generate spliced epitopes by two different mechanisms and as efficiently as non-spliced epitopes.蛋白酶体通过两种不同机制产生剪接表位,且效率与非剪接表位相同。
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本文引用的文献

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High-affinity T-cell receptor specific for MyD88 L265P mutation for adoptive T-cell therapy of B-cell malignancies.高亲和力 T 细胞受体特异性识别 MyD88 L265P 突变,用于 B 细胞恶性肿瘤的过继性 T 细胞治疗。
J Immunother Cancer. 2021 Jul;9(7). doi: 10.1136/jitc-2021-002410.
2
Response: Commentary: An Pipeline Identifying an HLA-A*02:01+ KRAS G12V+ Spliced Epitope Candidate for a Broad Tumor-Immune Response in Cancer Patients.回应:评论:一种用于识别癌症患者广泛肿瘤免疫反应的HLA-A*02:01+ KRAS G12V+剪接表位候选物的流程。
Front Immunol. 2021 Jul 13;12:679836. doi: 10.3389/fimmu.2021.679836. eCollection 2021.
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MHC 限制的免疫肽组中化学修饰的结构方面;对免疫识别的影响。
Front Chem. 2022 Aug 9;10:861609. doi: 10.3389/fchem.2022.861609. eCollection 2022.
Commentary: An - Pipeline Identifying an HLA-A*02:01 KRAS G12V Spliced Epitope Candidate for a Broad Tumor-Immune Response in Cancer Patients.
评论:一种用于识别HLA - A*02:01 KRAS G12V剪接表位候选物的管道,以引发癌症患者广泛的肿瘤免疫反应。
Front Immunol. 2021 Jul 13;12:523906. doi: 10.3389/fimmu.2021.523906. eCollection 2021.
4
Are There Indeed Spliced Peptides in the Immunopeptidome?免疫肽组中是否确实存在拼接肽?
Mol Cell Proteomics. 2021;20:100099. doi: 10.1016/j.mcpro.2021.100099. Epub 2021 May 20.
5
In vitro proteasome processing of neo-splicetopes does not predict their presentation in vivo.体外蛋白酶体对新剪接表位的加工并不预测其在体内的呈现。
Elife. 2021 Apr 20;10:e62019. doi: 10.7554/eLife.62019.
6
Elucidation of the Signatures of Proteasome-Catalyzed Peptide Splicing.解析蛋白酶体催化肽拼接的特征。
Front Immunol. 2020 Sep 24;11:563800. doi: 10.3389/fimmu.2020.563800. eCollection 2020.
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Identification of the Cryptic HLA-I Immunopeptidome.鉴定隐匿性 HLA-I 免疫肽组。
Cancer Immunol Res. 2020 Aug;8(8):1018-1026. doi: 10.1158/2326-6066.CIR-19-0886. Epub 2020 Jun 19.
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An Pipeline Identifying an HLA-A02:01 KRAS G12V Spliced Epitope Candidate for a Broad Tumor-Immune Response in Cancer Patients.一种鉴定 HLA-A02:01KRASG12V 剪接表位候选物的新方法,用于癌症患者的广泛肿瘤免疫反应。
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Comment on "A subset of HLA-I peptides are not genomically templated: Evidence for cis- and trans-spliced peptide ligands".评论“一组 HLA-I 肽不是基因组模板化的:顺式和反式剪接肽配体的证据”。
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An Update on Adoptive T-Cell Therapy and Neoantigen Vaccines.过继性T细胞疗法与新抗原疫苗的最新进展
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