Zhang Xiangxin, Huang Xiangdong, Wang Zhexin, Zhang Kejian
Department of Thoracic Surgery, Shanghai Chest Hospital, Shanghai Jiao Tong University, Shanghai, China.
Department of Thoracic Surgery, Chifeng City Hospital, Inner Mongolia, China.
Ann Transl Med. 2022 Feb;10(4):200. doi: 10.21037/atm-22-527.
Immune-related genes (IRGs) play an important role in the tumor immune microenvironment and affect tumor prognosis. This study aimed to establish a prognostic signature for malignant pleural mesothelioma (MPM) patients.
We obtained the relevant data of MPM patients in The Cancer Genome Atlas (TCGA), and univariate and multivariate Cox regression were used to construct the prediction signature and verify it with the external validation dataset GSE2549. A nomogram was then constructed, and its predictive ability was evaluated and analyzed the level of immune cell infiltration in different groups in the signature.
An IRG-related prognostic signature composed of , and was constructed, with patients divided into high-risk and low-risk groups according to the risk score. The survival time of overall survival (OS), progression-free survival (PFS), disease-free interval (DFI), and relapse-free survival (RFS) in low-risk groups was longer than in high-risk groups. Furthermore, the signature had high predictive performance, and the receiver operating characteristic (ROC) of 1, 2, and 3 years could reach 0.853, 0.881, and 0.914, respectively. The predictive accuracy of the signature was verified by using the independent GSE2549 dataset. The levels of activated CD4 T cells, immature dendritic cells, and type 2 T helper cells were higher in high-risk patients. The gene set enrichment analysis (GSEA) analysis showed that a high concentration and P53 signal pathways were found in high-risk groups.
This research developed and verified a new type of immune prognostic signature based on five IRGs, which can predict the prognosis of tumor patients and provide new ideas for individualized treatment.
免疫相关基因(IRGs)在肿瘤免疫微环境中起重要作用,并影响肿瘤预后。本研究旨在建立恶性胸膜间皮瘤(MPM)患者的预后标志物。
我们获取了癌症基因组图谱(TCGA)中MPM患者的相关数据,并使用单变量和多变量Cox回归构建预测标志物,并用外部验证数据集GSE2549进行验证。然后构建列线图,评估其预测能力,并分析标志物中不同组的免疫细胞浸润水平。
构建了一个由 、 和 组成的IRG相关预后标志物,根据风险评分将患者分为高风险和低风险组。低风险组的总生存期(OS)、无进展生存期(PFS)、无病间期(DFI)和无复发生存期(RFS)的生存时间长于高风险组。此外,该标志物具有较高的预测性能,1年、2年和3年的受试者工作特征(ROC)分别可达0.853、0.881和0.914。使用独立的GSE2549数据集验证了该标志物的预测准确性。高风险患者中活化的CD4 T细胞、未成熟树突状细胞和2型辅助性T细胞水平较高。基因集富集分析(GSEA)显示,在高风险组中发现了高浓度和P53信号通路。
本研究开发并验证了一种基于五个IRGs的新型免疫预后标志物,可预测肿瘤患者的预后,并为个体化治疗提供新思路。