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含醇消毒剂破坏冠状病毒模型膜的机制:耗散粒子动力学模拟研究。

How Ethanolic Disinfectants Disintegrate Coronavirus Model Membranes: A Dissipative Particle Dynamics Simulation Study.

机构信息

Eduard-Zintl-Institut für Anorganische und Physikalische Chemie, Technische Universität Darmstadt, Alarich-Weiss-Strasse 8, 64287 Darmstadt, Germany.

College of Sciences, Persian Gulf University, Boushehr 75168, Iran.

出版信息

J Chem Theory Comput. 2022 Apr 12;18(4):2597-2615. doi: 10.1021/acs.jctc.1c01120. Epub 2022 Mar 14.

Abstract

We have developed dissipative particle dynamics models for pure dipalmitoylphosphatidylcholine (DPPC), dioleoylphosphatidylcholine (DOPC), and dimyristoylphosphatidylcholine (DMPC) as well as their binary and ternary mixed membranes, as coronavirus model membranes. The stabilities of pure and mixed membranes, surrounded by aqueous solutions containing up to 70 mol % ethanol (alcoholic disinfectants), have been investigated at room temperature. We found that aqueous solutions containing 5-10 mol % ethanol already have a significant weakening effect on the pure and mixed membranes. The magnitude of the effect depends on the membrane composition and the ethanol concentration. Ethanol permeabilizes the membrane, causing its lateral swelling and thickness shrinking and reducing the orientational order of the hydrocarbon tail of the bilayer. The free energy barrier for the permeation of ethanol in the bilayers is considerably reduced by the ethanol uptake. The rupture-critical ethanol concentrations causing the membrane failure are 20.7, 27.5, and 31.7 mol % in the aqueous phase surrounding pure DMPC, DOPC, and DPPC membranes, respectively. Characterizing the failure of lipid membranes by a machine-learning neural network framework, we found that all mixed binary and/or ternary membranes disrupt when immersed in an aqueous solution containing a rupture-critical ethanol concentration, ranging from 20.7 to 31.7 mol %, depending on the composition of the membrane; the DPPC-rich membranes are more intact, while the DMPC-rich membranes are least intact. Due to the tight packing of long, saturated hydrocarbon tails in DPPC, increasing the DPPC content of the mixed membrane increases its stability against the disinfectant. At high DPPC concentrations, where the DOPC and DMPC molecules are confined between the DPPC lipids, the ordered hydrocarbon tails of DPPC also induce order in the DOPC and DMPC molecules and, hence, stabilize the membrane more. Our simulations on pure and mixed membranes of a diversity of compositions reveal that a maximum ethanol concentration of 32 mol % (55 wt %) in the alcohol-based disinfectants is enough to disintegrate any membrane composed of these three lipids.

摘要

我们已经开发了用于纯二棕榈酰磷脂酰胆碱(DPPC)、二油酰磷脂酰胆碱(DOPC)和二肉豆蔻酰磷脂酰胆碱(DMPC)以及它们的二元和三元混合膜的耗散粒子动力学模型,作为冠状病毒模型膜。在室温下,研究了含有高达 70 mol%乙醇(酒精消毒剂)的水溶液包围的纯膜和混合膜的稳定性。我们发现,含有 5-10 mol%乙醇的水溶液已经对纯膜和混合膜具有显著的弱化作用。这种影响的大小取决于膜的组成和乙醇的浓度。乙醇使膜渗透,导致其横向膨胀和厚度收缩,并降低双层烃尾的取向有序性。乙醇在双层中的渗透的自由能势垒由于乙醇的吸收而大大降低。导致膜失效的临界破裂乙醇浓度分别为 20.7、27.5 和 31.7 mol%,在纯 DMPC、DOPC 和 DPPC 膜周围的水相中。通过机器学习神经网络框架对脂质膜的失效进行特征化,我们发现所有混合二元和/或三元膜在浸入含有破裂临界乙醇浓度的水溶液中时都会破裂,范围从 20.7 到 31.7 mol%,具体取决于膜的组成;DPPC 丰富的膜更完整,而 DMPC 丰富的膜最不完整。由于 DPPC 中长而饱和的烃尾紧密堆积,增加混合膜中 DPPC 的含量会增加其对消毒剂的稳定性。在 DPPC 浓度较高的情况下,DOPC 和 DMPC 分子被 DPPC 脂质夹在中间,DPPC 的有序烃尾也会诱导 DOPC 和 DMPC 分子的有序性,从而更稳定膜。我们对多种组成的纯膜和混合膜的模拟表明,酒精基消毒剂中最高 32 mol%(55 wt%)的乙醇浓度足以使由这三种脂质组成的任何膜解体。

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