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通过引入多聚体 G-四链体/血红素 DNA zyme 增强信号的可视化链交换扩增检测非洲猪瘟病毒。

Signal-enhanced visual strand exchange amplification detection of African swine fever virus by the introduction of multimeric G-quadruplex/hemin DNAzyme.

机构信息

School of Life Sciences, Shanghai University, Shanghai, 200444, China.

出版信息

Anal Sci. 2022 Apr;38(4):675-682. doi: 10.1007/s44211-022-00087-6. Epub 2022 Mar 3.

Abstract

African swine fever virus (ASFV) causes hemorrhagic infectious disease in pigs with a fatality rate of nearly 100%. In this study, we developed a visual strand exchange amplification detection assay for ASFV. In the presence of ASFV, DNA amplification products containing multimeric G-quadruplex sequences were amplified by strand exchange amplification. These G-quadruplexes, assembled with hemin to form DNAzyme, displayed enhanced significant "turned-on" colorimetric signals to indicate detection results. The results showed that dimeric DNAzyme had the best visualization effect. Under the optimal reaction parameters, there was a linear relationship between the absorbance of the reaction solution at 417 nm and the logarithm of ASFV concentration ranged from 1 × 10 to 1 × 10 copies/μL, and the detection limit was 2.7 copies/μL. We hoped this visual assay could be helpful in the rapid and sensitive detection of ASFV, and the results of multimeric G-quadruplex/hemin DNAzyme could be helpful for the development of better visual detection assays.

摘要

非洲猪瘟病毒(ASFV)可引起猪的出血性传染病,死亡率接近 100%。在本研究中,我们开发了一种用于检测 ASFV 的可视化链交换扩增检测方法。在存在 ASFV 的情况下,通过链交换扩增来扩增包含多聚 G-四链体序列的 DNA 扩增产物。这些 G-四链体与血红素组装形成 DNA 酶,显示出增强的显著“开启”比色信号,以指示检测结果。结果表明,二聚体 DNA 酶具有最佳的可视化效果。在最佳反应参数下,反应溶液在 417nm 处的吸光度与 ASFV 浓度的对数之间呈线性关系,范围从 1×10 到 1×10 拷贝/μL,检测限为 2.7 拷贝/μL。我们希望这种可视化检测方法能够有助于快速灵敏地检测 ASFV,并且多聚 G-四链体/血红素 DNA 酶的结果有助于开发更好的可视化检测方法。

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