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使用持久同调表征难治性癫痫患者的脑网络动力学

Characterizing Brain Network Dynamics using Persistent Homology in Patients with Refractory Epilepsy.

作者信息

Zhang Jianzhe, Bauman Roland, Shafiabadi Nassim, Gurski Nick, Fernandez-BacaVaca Guadalupe, Sahoo Satya S

机构信息

Department of Population and Quantitative Health Sciences, Case Western Reserve University School of Medicine, Cleveland, OH, USA.

Department of Mathematics, Case Western Reserve University, Cleveland, OH, USA.

出版信息

AMIA Annu Symp Proc. 2022 Feb 21;2021:1244-1253. eCollection 2021.

Abstract

Epilepsy is a common serious neurological disorder that affects more than 65 million persons worldwide and it is characterized by repeated seizures that lead to higher mortality and disabilities with corresponding negative impact on the quality of life of patients. Network science methods that represent brain regions as nodes and the interactions between brain regions as edges have been extensively used in characterizing network changes in neurological disorders. However, the limited ability of graph network models to represent high dimensional brain interactions are being increasingly realized in the computational neuroscience community. In particular, recent advances in algebraic topology research have led to the development of a large number of applications in brain network studies using topological structures. In this paper, we build on a fundamental construct of cliques, which are all-to-all connected nodes with a k-clique in a graph G (V, E), where V is set of nodes and E is set of edges, consisting of k-nodes to characterize the brain network dynamics in epilepsy patients using topological structures. Cliques represent brain regions that are coupled for similar functions or engage in information exchange; therefore, cliques are suitable structures to characterize the dynamics of brain dynamics in neurological disorders. We propose to detect and use clique structures during well-defined clinical events, such as epileptic seizures, to combine non-linear correlation measures in a matrix with identification of geometric structures underlying brain connectivity networks to identify discriminating features that can be used for clinical decision making in epilepsy neurological disorder.

摘要

癫痫是一种常见的严重神经系统疾病,全球有超过6500万人受其影响,其特征是反复发作的癫痫,导致更高的死亡率和残疾率,对患者的生活质量产生相应的负面影响。将脑区表示为节点、脑区之间的相互作用表示为边的网络科学方法,已被广泛用于表征神经系统疾病中的网络变化。然而,图网络模型表示高维脑相互作用的能力有限,这一点在计算神经科学界正日益得到认识。特别是,代数拓扑研究的最新进展已导致在脑网络研究中使用拓扑结构开发了大量应用。在本文中,我们基于团的基本构造,团是图G(V,E)中具有k团的全连接节点,其中V是节点集,E是边集,由k个节点组成,以使用拓扑结构表征癫痫患者的脑网络动力学。团表示因相似功能而耦合或进行信息交换的脑区;因此,团是表征神经系统疾病中脑动力学的合适结构。我们建议在明确界定的临床事件(如癫痫发作)期间检测并使用团结构,将矩阵中的非线性相关度量与脑连接网络潜在几何结构的识别相结合,以识别可用于癫痫神经系统疾病临床决策的鉴别特征。

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本文引用的文献

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Cliques and cavities in the human connectome.人类连接组中的团块和空洞。
J Comput Neurosci. 2018 Feb;44(1):115-145. doi: 10.1007/s10827-017-0672-6. Epub 2017 Nov 16.
4
Network neuroscience.网络神经科学
Nat Neurosci. 2017 Feb 23;20(3):353-364. doi: 10.1038/nn.4502.
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Clique topology reveals intrinsic geometric structure in neural correlations.团拓扑揭示了神经相关性中的内在几何结构。
Proc Natl Acad Sci U S A. 2015 Nov 3;112(44):13455-60. doi: 10.1073/pnas.1506407112. Epub 2015 Oct 20.
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Proc Natl Acad Sci U S A. 2014 Dec 9;111(49):E5321-30. doi: 10.1073/pnas.1401752111. Epub 2014 Nov 17.
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