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人 Septin 八聚体的生化特性

Biochemical Characterization of a Human Septin Octamer.

作者信息

Fischer Martin, Frank Dominik, Rösler Reinhild, Johnsson Nils, Gronemeyer Thomas

机构信息

Institute of Molecular Genetics and Cell Biology, Ulm University, Ulm, Germany.

Core Unit Mass Spectrometry and Proteomics, Ulm University, Ulm, Germany.

出版信息

Front Cell Dev Biol. 2022 Mar 3;10:771388. doi: 10.3389/fcell.2022.771388. eCollection 2022.

DOI:10.3389/fcell.2022.771388
PMID:35309913
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8928218/
Abstract

Septins are part of the cytoskeleton and polymerize into non-polar filaments of heteromeric hexamers or octamers. They belong to the class of P-loop GTPases but the roles of GTP binding and hydrolysis on filament formation and dynamics are not well understood. The basic human septin building block is the septin rod, a hetero-octamer composed of SEPT2, SEPT6, SEPT7, and SEPT9 with a stoichiometry of 2:2:2:2 (2-6-7-9-9-7-6-2). Septin rods polymerize by end-to-end and lateral joining into linear filaments and higher ordered structures such as rings, sheets, and gauzes. We purified a recombinant human septin octamer from for experimentation that is able to polymerize into filaments. We could show that the C-terminal region of the central SEPT9 subunit contributes to filament formation and that the human septin rod decreases the rate of actin polymerization. We provide further first kinetic data on the nucleotide uptake- and exchange properties of human hexameric and octameric septin rods. We could show that nucleotide uptake prior to hydrolysis is a dynamic process and that a bound nucleotide is exchangeable. However, the hydrolyzed γ-phosphate is not released from the native protein complex. We consequently propose that GTP hydrolysis in human septins does not follow the typical mechanism known from other small GTPases.

摘要

Septin蛋白是细胞骨架的一部分,能够聚合成异源六聚体或八聚体的非极性细丝。它们属于P环GTP酶家族,但GTP结合和水解在细丝形成及动力学方面的作用尚未完全明确。人类Septin蛋白的基本构建单元是Septin杆,它是一种异源八聚体,由SEPT2、SEPT6、SEPT7和SEPT9组成,化学计量比为2:2:2:2(2-6-7-9-9-7-6-2)。Septin杆通过端对端和侧向连接聚合成线性细丝以及更高阶的结构,如环、片层和网状结构。我们从……中纯化出一种重组人Septin八聚体用于实验,该八聚体能够聚合成细丝。我们发现中央SEPT9亚基的C末端区域有助于细丝形成,并且人Septin杆降低了肌动蛋白聚合的速率。我们提供了关于人六聚体和八聚体Septin杆核苷酸摄取和交换特性的进一步初步动力学数据。我们发现水解前的核苷酸摄取是一个动态过程,并且结合的核苷酸是可交换的。然而,水解产生的γ-磷酸并未从天然蛋白复合物中释放出来。因此,我们提出人类Septin蛋白中的GTP水解并不遵循其他小GTP酶已知的典型机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55e9/8928218/b5884fd06a89/fcell-10-771388-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55e9/8928218/1a602e75bd9c/fcell-10-771388-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55e9/8928218/38846de6479d/fcell-10-771388-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55e9/8928218/df305ff1f5ed/fcell-10-771388-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55e9/8928218/b5884fd06a89/fcell-10-771388-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55e9/8928218/1a602e75bd9c/fcell-10-771388-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55e9/8928218/38846de6479d/fcell-10-771388-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55e9/8928218/df305ff1f5ed/fcell-10-771388-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/55e9/8928218/b5884fd06a89/fcell-10-771388-g004.jpg

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Dysregulation of septin cytoskeletal organization in the trabecular meshwork contributes to ocular hypertension.小梁网中septin细胞骨架组织的失调会导致眼压升高。
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本文引用的文献

1
Insights into animal septins using recombinant human septin octamers with distinct SEPT9 isoforms.利用具有不同 SEPT9 异构体的重组人 septin 八聚体深入了解动物 septin。
J Cell Sci. 2021 Aug 1;134(15). doi: 10.1242/jcs.258484. Epub 2021 Aug 5.
2
An atomic model for the human septin hexamer by cryo-EM.通过 cryo-EM 构建的人类六聚体 septin 原子模型。
J Mol Biol. 2021 Jul 23;433(15):167096. doi: 10.1016/j.jmb.2021.167096. Epub 2021 Jun 9.
3
Revised subunit order of mammalian septin complexes explains their in vitro polymerization properties.
四聚体胞质分裂蛋白复合物的结构揭示了一个对 NC 界面完整性至关重要的疏水性元件。
Commun Biol. 2024 Jan 6;7(1):48. doi: 10.1038/s42003-023-05734-w.
4
Septin and actin contributions to endothelial cell-cell junctions and monolayer integrity.Septins和肌动蛋白对内皮细胞间连接及单层完整性的作用。
Cytoskeleton (Hoboken). 2023 Jul-Aug;80(7-8):228-241. doi: 10.1002/cm.21732. Epub 2022 Oct 17.
修正了哺乳动物 septin 复合物的亚基顺序,解释了它们在体外聚合特性。
Mol Biol Cell. 2021 Feb 1;32(3):289-300. doi: 10.1091/mbc.E20-06-0398. Epub 2020 Dec 2.
4
Production and analysis of a mammalian septin hetero-octamer complex.真核生物 septin 异八聚体复合物的制备与分析
Cytoskeleton (Hoboken). 2020 Nov;77(11):485-499. doi: 10.1002/cm.21643. Epub 2020 Nov 23.
5
Molecular Recognition at Septin Interfaces: The Switches Hold the Key.分子在 septin 界面上的识别:开关掌握关键。
J Mol Biol. 2020 Oct 2;432(21):5784-5801. doi: 10.1016/j.jmb.2020.09.001. Epub 2020 Sep 7.
6
A complete compendium of crystal structures for the human SEPT3 subgroup reveals functional plasticity at a specific septin interface.人类SEPT3亚组晶体结构的完整汇编揭示了特定septin界面处的功能可塑性。
IUCrJ. 2020 Mar 28;7(Pt 3):462-479. doi: 10.1107/S2052252520002973. eCollection 2020 May 1.
7
Dissecting the nucleotide binding properties of the septins from S. cerevisiae.解析酿酒酵母 septin 的核苷酸结合特性。
Cytoskeleton (Hoboken). 2019 Jan;76(1):45-54. doi: 10.1002/cm.21484. Epub 2018 Nov 15.
8
Septin structure and filament assembly.Septins的结构与丝状组装。
Biophys Rev. 2017 Oct;9(5):481-500. doi: 10.1007/s12551-017-0320-4. Epub 2017 Sep 13.
9
The step-wise pathway of septin hetero-octamer assembly in budding yeast.芽殖酵母中Septin异源八聚体组装的逐步途径。
Elife. 2017 May 25;6:e23689. doi: 10.7554/eLife.23689.
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Crystal structure of Cdc11, a septin subunit from Saccharomyces cerevisiae.酿酒酵母中一种septin亚基Cdc11的晶体结构。
J Struct Biol. 2016 Mar;193(3):157-161. doi: 10.1016/j.jsb.2016.01.004. Epub 2016 Jan 9.