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儿童焦虑障碍的全外显子 DNA 测序确定罕见的新生致病变异。

Whole-exome DNA sequencing in childhood anxiety disorders identifies rare de novo damaging coding variants.

机构信息

Child Study Center, Yale University School of Medicine, New Haven, Connecticut, USA.

Department of Psychiatry, Yale University School of Medicine, New Haven, Connecticut, USA.

出版信息

Depress Anxiety. 2022 Jun;39(6):474-484. doi: 10.1002/da.23251. Epub 2022 Mar 21.

DOI:10.1002/da.23251
PMID:35312124
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9246845/
Abstract

BACKGROUND

Genetic factors contribute to the development of anxiety disorders, yet few risk genes have been previously identified. One genomic approach that has achieved success in identifying risk genes in related childhood neuropsychiatric conditions is investigations of de novo variants, which has yet to be leveraged in childhood anxiety disorders.

METHODS

We performed whole-exome DNA sequencing in 76 parent-child trios (68 trios after quality control) recruited from a childhood anxiety disorder clinic and compared rates of rare and ultra-rare de novo variants with 790 previously sequenced control trios (783 trios after quality control). We then explored overlap with risk genes for other neuropsychiatric conditions and enrichment in biologic pathways.

RESULTS

Rare and ultra-rare de novo likely gene disrupting and predicted damaging missense genetic variants are enriched in anxiety disorder probands compared with controls (rare variant rate ratio 1.97, 95% confidence interval [CI]: 1.11-3.34, p = .03; ultra-rare variant rate ratio 2.59, 95% CI: 1.35-4.70, p = .008). These de novo damaging variants occur in individuals with a variety of childhood anxiety disorders and impact genes that have been associated with other neuropsychiatric conditions. Exploratory network analyses reveal enrichment of deleterious variants in canonical biological pathways.

CONCLUSIONS

These findings provide a path for identifying risk genes and promising biologic pathways in childhood anxiety disorders by de novo genetic variant detection. Our results suggest the discovery potential of applying this approach in larger anxiety disorder cohorts to advance our understanding of the underlying biology of these common and debilitating conditions.

摘要

背景

遗传因素导致焦虑障碍的发生,但之前很少有风险基因被发现。一种在相关儿童神经精神疾病中识别风险基因取得成功的基因组方法是研究新生变异,这在儿童焦虑障碍中尚未得到利用。

方法

我们对 76 个来自儿童焦虑障碍诊所的父母-子女三体型(经质量控制后为 68 个三体型)进行了全外显子 DNA 测序,并比较了罕见和超罕见新生变异的发生率与 790 个先前测序的对照三体型(经质量控制后为 783 个三体型)。然后,我们探讨了与其他神经精神疾病风险基因的重叠和生物学途径的富集。

结果

与对照组相比,焦虑障碍患者中罕见和超罕见新生的可能导致基因功能丧失和预测有害错义遗传变异丰富(罕见变异率比 1.97,95%置信区间[CI]:1.11-3.34,p=.03;超罕见变异率比 2.59,95% CI:1.35-4.70,p=.008)。这些新生的破坏性变异发生在患有各种儿童焦虑障碍的个体中,并影响与其他神经精神疾病相关的基因。探索性网络分析显示,有害变异在典型生物学途径中富集。

结论

这些发现为通过新生遗传变异检测确定儿童焦虑障碍的风险基因和有前途的生物学途径提供了一种途径。我们的研究结果表明,通过将这种方法应用于更大的焦虑障碍队列,有可能发现新的风险基因,从而推进对这些常见和使人衰弱的疾病的潜在生物学的理解。

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