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[大肠杆菌基因组功能区一级结构的统计特征。I. 频率特征]

[Statistical characteristics in primary structures of functional regions of Escherichia coli genome. I. Frequency characteristics].

作者信息

Borodovskiĭ M Iu, Sprizhitskiĭ Iu A, Golovanov E I, Aleksandrov A A

出版信息

Mol Biol (Mosk). 1986 Jul-Aug;20(4):1014-23.

PMID:3531810
Abstract

Analysis of the frequencies of occurrence of mono- and dinucleotides in sequenced E. coli DNA fragments was performed. The DNA sequences of total length 135 000 nucleotides were considered. It was demonstrated that the fragments of DNA which have different functional properties also have different parameters of neighbour nucleotides correlation. Moreover, periodical positional dependence of correlation parameters in coding regions was found. The evolution significance of stated observation is discussed, so as the opportunity of using them in the special model of nucleotide's sequences, which is needed for development of the computer recognition algorithms for genomic functional units.

摘要

对测序的大肠杆菌DNA片段中单核核苷酸和双核核苷酸的出现频率进行了分析。考虑了总长度为135000个核苷酸的DNA序列。结果表明,具有不同功能特性的DNA片段也具有不同的相邻核苷酸相关性参数。此外,还发现了编码区域中相关性参数的周期性位置依赖性。讨论了上述观察结果的进化意义,以及将其用于核苷酸序列特殊模型的可能性,这是开发基因组功能单元计算机识别算法所必需的。

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