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使用卷积神经网络在大鼠毒理学研究中定量肝细胞有丝分裂。

Quantification of Hepatocellular Mitoses in a Toxicological Study in Rats Using a Convolutional Neural Network.

机构信息

Boehringer Ingelheim Pharma GmbH & Co. KG, Biberach an der Riß, Germany.

出版信息

Toxicol Pathol. 2022 Apr;50(3):344-352. doi: 10.1177/01926233221083500. Epub 2022 Mar 23.

Abstract

Convolutional neural networks (CNNs) have been recognized as valuable tools for rapid quantitative analysis of morphological changes in toxicologic histopathology. We have assessed the performance of CNN-based (Halo-AI) mitotic figure detection in hepatocytes in comparison with detection by pathologists. In addition, we compared with Ki-67 and 5-bromodesoxyuridin (BrdU) immunohistochemistry labeling indices (LIs) obtained by image analysis. Tissues were from an exploratory toxicity study with a glycogen synthase kinase-3 (GSK-3) inhibitor. Our investigations revealed that (1) the CNN achieved similarly accurate but faster results than pathologists, (2) results of mitotic figure detection were comparable to Ki-67 and BrdU LIs, and (3) data from different methods were only moderately correlated. The latter is likely related to differences in the cell cycle component captured by each method. This highlights the importance of considering the differences of the available methods upon selection. Also, the pharmacology of our test item acting as a GSK-3 inhibitor potentially reduced the correlation. We conclude that hepatocyte cell proliferation assessment by CNNs can have several advantages when compared with the current gold standard: it relieves the pathologist of tedious routine tasks and contributes to standardization of results; the CNN algorithm can be shared and iteratively improved; it can be performed on routine histological slides; it does not require an additional animal experiment and in this way can contribute to animal welfare according to the 3R principles.

摘要

卷积神经网络 (CNN) 已被公认为快速定量分析毒理学组织病理学形态变化的有价值的工具。我们评估了基于 CNN 的(Halo-AI)有丝分裂图检测肝细胞的性能,与病理学家的检测进行了比较。此外,我们还将其与通过图像分析获得的 Ki-67 和 5-溴脱氧尿苷 (BrdU) 免疫组化标记指数 (LI) 进行了比较。组织来自使用糖原合酶激酶-3 (GSK-3) 抑制剂的探索性毒性研究。我们的研究表明:(1) CNN 取得了与病理学家一样准确但更快的结果;(2) 有丝分裂图检测结果与 Ki-67 和 BrdU LI 相当;(3) 来自不同方法的数据相关性仅适中。后者可能与每种方法所捕获的细胞周期成分的差异有关。这凸显了在选择时考虑可用方法差异的重要性。此外,作为 GSK-3 抑制剂的测试项目的药理学可能降低了相关性。我们得出结论,与当前的金标准相比,CNN 对肝细胞增殖的评估具有几个优势:它可以减轻病理学家繁琐的日常任务,并有助于结果的标准化;CNN 算法可以共享和迭代改进;它可以在常规组织学幻灯片上进行;它不需要额外的动物实验,因此可以根据 3R 原则为动物福利做出贡献。

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