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转录组学和蛋白质组学分析的整合揭示了感染SariNPV后家蚕中肠免疫途径调控的新见解。

Integration of Transcriptomic and Proteomic Analyses Reveals New Insights into the Regulation of Immune Pathways in Midgut of upon SariNPV Infection.

作者信息

Li Gang, Zhang Benzheng, Zhang Huan, Xu Anying, Qian Heying

机构信息

The Sericultural Research Institute, Jiangsu University of Science and Technology, Zhenjiang 212003, China.

State Key Laboratory of Integrated Management of Pest Insects and Rodents, Beijing 100101, China.

出版信息

Insects. 2022 Mar 16;13(3):294. doi: 10.3390/insects13030294.

Abstract

nucleopolyhedrovirus (SariNPV) is one of the main pathogens of sericulture and its infection causes severe impacts on economic sericulture development. To explore and reveal the molecular mechanisms of in response to SariNPV infection, we employed RNA sequencing (RNA-seq), adopting isobaric tags for relative and absolute quantitation (iTRAQ), and carried out combination analysis of the obtained differentially expressed genes (DEGs) and proteins (DEPs). Through transcriptome sequencing, a total of 2535 DEGs were detected, and with iTRAQ, 434 DEPs with significant expression difference were identified. Through correlation analysis, we found that the expression trends of 116 differentially expressed proteins were the same as those of differentially expressed genes (including 106 up-regulated and 10 down-regulated). Twenty-five key differentially expressed genes (proteins) involved in several signaling and immune related pathways (mainly involving Toll, Imd, Jak-STAT and Wnt signaling pathways, as well as other immune related pathways) were screened through real-time quantitative PCR. Our results, not only provide insights into the pathogenic mechanism of SariNPV infection in ricin silkworm and the immune response mechanism within the host, but also provide a significant contribution for identifying and preventing diseases caused by SariNPV.

摘要

核型多角体病毒(SariNPV)是养蚕业的主要病原体之一,其感染对经济养蚕业的发展造成严重影响。为了探索和揭示蓖麻蚕对SariNPV感染的分子机制,我们采用RNA测序(RNA-seq)、相对和绝对定量的等压标签(iTRAQ),并对获得的差异表达基因(DEG)和蛋白质(DEP)进行联合分析。通过转录组测序,共检测到2535个DEG,通过iTRAQ鉴定出434个表达差异显著的DEP。通过相关性分析,我们发现116个差异表达蛋白的表达趋势与差异表达基因相同(包括106个上调和10个下调)。通过实时定量PCR筛选出25个参与多种信号和免疫相关途径(主要涉及Toll、Imd、Jak-STAT和Wnt信号通路以及其他免疫相关途径)的关键差异表达基因(蛋白质)。我们的结果不仅为了解SariNPV感染蓖麻蚕的致病机制和宿主内的免疫反应机制提供了见解,也为鉴定和预防由SariNPV引起的疾病做出了重要贡献。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f93c/8949121/747f50d14bc6/insects-13-00294-g001a.jpg

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