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沙特阿拉伯吉达血液系统恶性肿瘤中的表达及突变分析

Expression and Mutational Analysis in Hematological Malignancy in Jeddah, Saudi Arabia.

作者信息

Alkhatabi Heba, Yasin Elrashed B, Mirza Zeenat, Alserihi Raed, Felimban Raed, Elaimi Aisha, Shaabad Manal, Alharbi Lina, Ahmed Hameeda, Alameer Abdulrahman M, Mathkoor Abdullah Ebraheem, Barefah Ahmed Salleh

机构信息

Department of Medical Laboratory Technology, Faculty of Applied Medical Sciences, King Abdulaziz University, Jeddah 21589, Saudi Arabia.

Center of Excellence in Genomic Medicine Research (CEGMR), King Abdulaziz University, Jeddah 80200, Saudi Arabia.

出版信息

Diagnostics (Basel). 2022 Mar 16;12(3):724. doi: 10.3390/diagnostics12030724.

Abstract

BACKGROUND

Tumor protein 53 () is a tumor-suppressor gene and plays an essential role in apoptosis, cell cycle arrest, genomic stability, and DNA repair. Although it is the most often mutated gene in human cancer, it has respectively low frequency in hematological malignancy but is significantly linked with complex karyotype, poor prognosis, and chemotherapeutic response. Nevertheless, the prevalence and prognostic role of mutations in hematological malignancy in Saudi patients are not well reported. We, therefore, aim to assess the frequency of mutations in hematological malignancies in Saudi Arabia.

METHOD

20 different hematological malignancy samples were tested using fluorescence in situ hybridization (FISH) technique for deletion detection and next-generation sequencing (NGS) targeted panel was applied on 10 samples for mutations identification specifically mutation.

RESULTS

deletion was detected in 6 of 20 samples by FISH. Most of the 6 patients with deletion had acute lymphoblastic leukemia (ALL), and majority of them were child. NGS result revealed one heterozygous missense mutation in exon 5 of the gene (c. G9963A, p.H175R).

CONCLUSION

To the best of our knowledge, the mutation is novel variant, and the first time we are reporting their association with myelodysplastic syndromic individual with complex karyotype. This study recommends further analysis of genomic mutations on bigger cohorts, utilizing high throughput technologies.

摘要

背景

肿瘤蛋白53()是一种肿瘤抑制基因,在细胞凋亡、细胞周期停滞、基因组稳定性和DNA修复中起重要作用。虽然它是人类癌症中最常发生突变的基因,但在血液系统恶性肿瘤中的突变频率较低,不过与复杂核型、预后不良和化疗反应显著相关。然而,沙特患者血液系统恶性肿瘤中突变的发生率和预后作用尚未得到充分报道。因此,我们旨在评估沙特阿拉伯血液系统恶性肿瘤中突变的频率。

方法

使用荧光原位杂交(FISH)技术检测20份不同的血液系统恶性肿瘤样本中的缺失情况,并对10份样本应用二代测序(NGS)靶向panel来鉴定突变,特别是突变。

结果

通过FISH在20份样本中的6份中检测到缺失。6例有缺失的患者大多患有急性淋巴细胞白血病(ALL),且大多数是儿童。NGS结果显示基因外显子5中有一个杂合错义突变(c.G9963A,p.H175R)。

结论

据我们所知,该突变是一种新的变异,我们首次报道了它们与具有复杂核型的骨髓增生异常综合征个体的关联。本研究建议利用高通量技术对更大的队列进行基因组突变的进一步分析。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37a1/8946951/9f8795705756/diagnostics-12-00724-g001a.jpg

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