Libeskind-Hadas Ran
Kravis Department of Integrated Sciences, Claremont McKenna College, 888 N. Columbia Avenue, Claremont, CA 91711, USA.
Life (Basel). 2022 Mar 17;12(3):443. doi: 10.3390/life12030443.
Phylogenetic reconciliation is a fundamental method in the study of pairs of coevolving species. This paper provides an overview of the underlying theory of reconciliation in the context of host-symbiont cophylogenetics, identifying some of the major challenges to users of these methods, such as selecting event costs and selecting representative reconciliations. Next, recent advances to address these challenges are discussed followed by a discussion of several established and recent software tools.
系统发育和解是研究共同进化物种对的一种基本方法。本文概述了宿主 - 共生体协同系统发育背景下和解的基础理论，指出了这些方法使用者面临的一些主要挑战，例如选择事件成本和选择代表性的和解方案。接下来，讨论了应对这些挑战的最新进展，随后介绍了几种已有的和近期的软件工具。
