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拉丁美洲艰难梭菌感染:文献综述(1984-2021)。

Clostridioides difficile in Latin America: A comprehensive review of literature (1984-2021).

机构信息

Facultad de Microbiología, Universidad de Costa Rica, Costa Rica; Laboratorio de Investigación en Bacteriología Anaerobia (LIBA), Universidad de Costa Rica, Costa Rica; Centro de Investigación en Enfermedades Tropicales (CIET), Universidad de Costa Rica, Costa Rica.

出版信息

Anaerobe. 2022 Apr;74:102547. doi: 10.1016/j.anaerobe.2022.102547. Epub 2022 Mar 22.

Abstract

This narrative review summarizes literature on C. difficile and C. difficile infections (CDI) that emerged from Latin America (LA) between 1984 and 2021. The revised information includes papers in English, Spanish, or Portuguese that were retrieved from the databases Pubmed, Scopus, Web of Science, Google Scholar, Scielo, and Lilacs. Information is presented chronologically and segregated in subregions, focusing on clinical presentation, risk factors, detection and typing methods, prevalence and incidence rates, circulating strains, and, when available, phenotypic traits, such as antimicrobial susceptibility patterns. Studies dealing with cases, clinical aspects of CDI, and performance evaluations of diagnostic methods predominated. However, they showed substantial differences in case definitions, measuring units, populations, and experimental designs. Although a handful of autochthonous strains were identified, predominantly in Brazil and Costa Rica, the presentation and epidemiology of CDI in LA were highly comparable to what has been reported in other regions of the world. Few laboratories isolate and type this bacterium and even less generate whole genome sequences or perform basic science on C. difficile. Less than ten countries lead academic productivity on C. difficile or CDI-related topics, and information from various countries in Central America and the Caribbean is still lacking. The review ends with a global interpretation of the data and recommendations to further develop and consolidate this discipline in LA.

摘要

这篇综述总结了 1984 年至 2021 年间拉丁美洲(LA)出现的艰难梭菌(C. difficile)和艰难梭菌感染(CDI)的文献。修订后的信息包括从 Pubmed、Scopus、Web of Science、Google Scholar、Scielo 和 Lilacs 数据库中检索到的英文、西班牙文或葡萄牙文论文。信息按时间顺序呈现,并按次区域进行分类,重点介绍临床表现、危险因素、检测和分型方法、流行率和发病率、循环菌株以及(如有)表型特征,如抗菌药物敏感性模式。研究主要涉及病例、CDI 的临床方面以及诊断方法的性能评估。然而,它们在病例定义、测量单位、人群和实验设计方面存在很大差异。尽管鉴定出了少数土著菌株,主要在巴西和哥斯达黎加,但 LA 的 CDI 表现和流行病学与世界其他地区报告的情况高度相似。很少有实验室分离和分型这种细菌,甚至更少生成全基因组序列或对艰难梭菌进行基础科学研究。不到十个国家主导着关于艰难梭菌或 CDI 相关主题的学术产出,中美洲和加勒比地区的各个国家的信息仍然缺乏。综述以对数据的全球解释和建议结束,旨在进一步发展和巩固 LA 地区的这一学科。

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