Muthukrishnan Sarmila, Mohd-Padil Hirzahida, Mohamed-Alipiah Norfarrah, Natrah Ikhsan
Aquatic Animal Health and Therapeutics Laboratory, Institute of Bioscience, Universiti Putra Malaysia, UPM, Serdang, Selangor 43400, Malaysia.
Department of Aquaculture, Faculty of Agriculture, Universiti Putra Malaysia, Serdang, Selangor 43400, Malaysia.
Data Brief. 2022 Mar 11;42:108049. doi: 10.1016/j.dib.2022.108049. eCollection 2022 Jun.
is a genus belonging to the class Gammaproteobacteria and the family Alteromonadaceae. This genus is a Gram-negative bacterium which can be found in a wide range of marine and saline water environments. Here, we present the genome sequence of sp. strain CA1 that was isolated from the indigenous diatom found in the whiteleg shrimp, (Bonne 1931) pond in Malaysia. Genome sequencing was done using Pacbio and Illumina sequencing platforms. hybrid assembly based on Pacbio long reads and high quality Illumina short reads yielded a complete circular chromosome with 4.7 M base pair (bp) in size. This genome was submitted to Genbank, NCBI database and can be accessed under accession number: NZ_CP071785 and the BioProject acession number PRJNA710741. This data could be useful for other studies on microalgae and bacteria interaction, and comparative genomics analysis of other species.
是γ-变形菌纲交替单胞菌科的一个属。该属是革兰氏阴性菌，可在多种海洋和咸水环境中发现。在此，我们展示了从马来西亚凡纳滨对虾（Bonne，1931）池塘中发现的本地硅藻分离出的sp.菌株CA1的基因组序列。基因组测序使用Pacbio和Illumina测序平台完成。基于Pacbio长读长和高质量Illumina短读长的混合组装产生了一个大小为470万个碱基对（bp）的完整环状染色体。该基因组已提交至Genbank、NCBI数据库，可通过登录号NZ_CP071785访问，生物项目登录号为PRJNA710741。该数据可能对其他关于微藻与细菌相互作用的研究以及其他物种的比较基因组学分析有用。
