Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, Gansu, China.
Plant Signal Behav. 2022 Dec 31;17(1):2014677. doi: 10.1080/15592324.2021.2014677.
Epigenetic regulation is one of the most precise and subtle ways of gene regulation, including DNA modification, histone modification, RNA modification, histone variants, chromatin remodeling, and long non-coding RNAs (lncRNAs). Chromatin modification is the most basic type of epigenetic regulation, which plays a key role in a myriad of developmental and physiological processes that have been thoroughly studied. These modifications are usually completed by a series of conserved chromatin modification complexes in eukaryotes. In recent years, a series of lncRNAs in organisms also have been described as having irreplaceable functions in biological environment adaptation, especially in biotic and abiotic stresses. Moreover, these molecules form a sophisticated regulatory network through mutual cross-regulation to achieve quantitative expression of key environmental response genes to external signals. For instance, the function of lncRNAs will directly or indirectly depend on the function of the chromatin modification complex. In this review, we mainly focus on chromatin modification, lncRNA, and their coordination mechanism to achieve the high adaptability of plants in low-temperature environments. We highlight recent findings and insights into lncRNA-mediated local chromatin environment changes during plant growth under low temperature via chromatin modification complexes, including target gene specificity for different lncRNA.
表观遗传调控是基因调控中最精确和最微妙的方式之一,包括 DNA 修饰、组蛋白修饰、RNA 修饰、组蛋白变体、染色质重塑和长非编码 RNA(lncRNA)。染色质修饰是最基本的表观遗传调控类型,在已被深入研究的许多发育和生理过程中起着关键作用。这些修饰通常由真核生物中一系列保守的染色质修饰复合物完成。近年来,生物体中的一系列 lncRNA 也被描述为在生物环境适应中具有不可替代的功能,尤其是在生物和非生物胁迫下。此外,这些分子通过相互交叉调控形成复杂的调控网络,以实现关键环境响应基因对外界信号的定量表达。例如,lncRNA 的功能将直接或间接依赖于染色质修饰复合物的功能。在这篇综述中,我们主要关注染色质修饰、lncRNA 及其协调机制,以实现植物在低温环境下的高度适应性。我们强调了最近的发现和对通过染色质修饰复合物在植物低温生长过程中 lncRNA 介导的局部染色质环境变化的见解,包括不同 lncRNA 的靶基因特异性。