Suppr超能文献

长非编码 RNA 在植物中的表观遗传调控。

Epigenetic regulation by long noncoding RNAs in plants.

出版信息

Chromosome Res. 2013 Dec;21(6-7):685-93. doi: 10.1007/s10577-013-9392-6.

Abstract

Many eukaryotes, including plants, produce a large number of long noncoding RNAs (lncRNAs).Growing number of lncRNAs are being reported to have regulatory roles in various developmental processes.Emerging mechanisms underlying the function of lncRNAs indicate that lncRNAs are versatile regulatory molecules. They function as potent cis- and trans-regulators of gene expression, including the formation of modular scaffolds that recruit chromatin-modifying complexes to target chromatin. LncRNAs have also been reported in plants. Here, we describe our current understanding on potential roles of lncRNA in plants.

摘要

许多真核生物,包括植物,都会产生大量的长链非编码 RNA(lncRNA)。越来越多的 lncRNA 被报道在各种发育过程中具有调节作用。lncRNA 功能的新兴机制表明,lncRNA 是多功能的调节分子。它们作为强有力的顺式和反式基因表达调节剂发挥作用,包括形成模块化支架,招募染色质修饰复合物到靶染色质。lncRNA 在植物中也有报道。在这里,我们描述了我们目前对 lncRNA 在植物中潜在作用的理解。

相似文献

1
Epigenetic regulation by long noncoding RNAs in plants.
Chromosome Res. 2013 Dec;21(6-7):685-93. doi: 10.1007/s10577-013-9392-6.
2
LncRNA Structural Characteristics in Epigenetic Regulation.
Int J Mol Sci. 2017 Dec 8;18(12):2659. doi: 10.3390/ijms18122659.
3
Mechanisms of epigenetic regulation of transcription by lncRNAs in plants.
IUBMB Life. 2023 May;75(5):427-439. doi: 10.1002/iub.2681. Epub 2022 Oct 27.
4
Long noncoding RNA: unveiling hidden layer of gene regulatory networks.
Trends Plant Sci. 2012 Jan;17(1):16-21. doi: 10.1016/j.tplants.2011.10.008. Epub 2011 Nov 20.
5
Perspectives on the mechanism of transcriptional regulation by long non-coding RNAs.
Epigenetics. 2014 Jan;9(1):13-20. doi: 10.4161/epi.26700. Epub 2013 Oct 22.
6
Long non-coding RNA and chromatin remodeling.
RNA Biol. 2015;12(10):1094-8. doi: 10.1080/15476286.2015.1063770. Epub 2015 Jul 15.
7
Chromatin RNA Immunoprecipitation (ChRIP).
Methods Mol Biol. 2018;1689:65-76. doi: 10.1007/978-1-4939-7380-4_6.
8
Long noncoding RNAs in lipid metabolism.
Curr Opin Lipidol. 2018 Jun;29(3):224-232. doi: 10.1097/MOL.0000000000000503.
9
Long noncoding RNA in genome regulation: prospects and mechanisms.
RNA Biol. 2010 Sep-Oct;7(5):582-5. doi: 10.4161/rna.7.5.13216. Epub 2010 Sep 1.
10
The role of antisense long noncoding RNA in small RNA-triggered gene activation.
RNA. 2014 Dec;20(12):1916-28. doi: 10.1261/rna.043968.113. Epub 2014 Oct 24.

引用本文的文献

1
LncRNAOmics: A Comprehensive Review of Long Non-Coding RNAs in Plants.
Genes (Basel). 2025 Jun 29;16(7):765. doi: 10.3390/genes16070765.
2
Current perspectives of lncRNAs in abiotic and biotic stress tolerance in plants.
Front Plant Sci. 2024 Jan 8;14:1334620. doi: 10.3389/fpls.2023.1334620. eCollection 2023.
3
Genome-wide analysis of long noncoding RNA profiles in pseudorabies-virus-infected PK15 cells.
Arch Virol. 2023 Sep 5;168(10):240. doi: 10.1007/s00705-023-05859-7.
5
Investigating nicotine pathway-related long non-coding RNAs in tobacco.
Front Genet. 2023 Jan 19;13:1102183. doi: 10.3389/fgene.2022.1102183. eCollection 2022.
7
Analysis of M6A associated lncRNAs in prognosis and immune response of NSCLC patients.
Am J Transl Res. 2022 Dec 15;14(12):8457-8472. eCollection 2022.
8
A Green Light to Switch on Genes: Revisiting Trithorax on Plants.
Plants (Basel). 2022 Dec 23;12(1):75. doi: 10.3390/plants12010075.
9
A Novel lncRNA SAAL Suppresses IAV Replication by Promoting Innate Responses.
Microorganisms. 2022 Nov 25;10(12):2336. doi: 10.3390/microorganisms10122336.
10
LncPheDB: a genome-wide lncRNAs regulated phenotypes database in plants.
aBIOTECH. 2022 Oct 5;3(3):169-177. doi: 10.1007/s42994-022-00084-3. eCollection 2022 Sep.

本文引用的文献

1
R-loop stabilization represses antisense transcription at the Arabidopsis FLC locus.
Science. 2013 May 3;340(6132):619-21. doi: 10.1126/science.1234848.
2
Coordination of the vernalization response through a VIN3 and FLC gene family regulatory network in Arabidopsis.
Plant Cell. 2013 Feb;25(2):454-69. doi: 10.1105/tpc.112.104760. Epub 2013 Feb 15.
3
Genome-wide analysis uncovers regulation of long intergenic noncoding RNAs in Arabidopsis.
Plant Cell. 2012 Nov;24(11):4333-45. doi: 10.1105/tpc.112.102855. Epub 2012 Nov 6.
4
Arabidopsis trithorax-related3/SET domain GROUP2 is required for the winter-annual habit of Arabidopsis thaliana.
Plant Cell Physiol. 2012 May;53(5):834-46. doi: 10.1093/pcp/pcs021. Epub 2012 Feb 28.
5
Targeted RNA sequencing reveals the deep complexity of the human transcriptome.
Nat Biotechnol. 2011 Nov 13;30(1):99-104. doi: 10.1038/nbt.2024.
6
Environmentally coordinated epigenetic silencing of FLC by protein and long noncoding RNA components.
Curr Opin Plant Biol. 2012 Feb;15(1):51-6. doi: 10.1016/j.pbi.2011.10.004. Epub 2011 Nov 9.
8
9
lincRNAs act in the circuitry controlling pluripotency and differentiation.
Nature. 2011 Aug 28;477(7364):295-300. doi: 10.1038/nature10398.
10
Vernalization-repression of Arabidopsis FLC requires promoter sequences but not antisense transcripts.
PLoS One. 2011;6(6):e21513. doi: 10.1371/journal.pone.0021513. Epub 2011 Jun 21.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验