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从伊拉克腹泻患者中分离的铁超氧化物歧化酶基因的检测和测序。

Detection and Sequencing of Iron Superoxide Dismutase Gene in Isolated from Patients with Diarrhea in Iraq.

机构信息

Department of Microbiology, College of Medicine, University of Babylon, Babylon, Iraq.

出版信息

Arch Razi Inst. 2021 Nov 30;76(5):1289-1295. doi: 10.22092/ari.2021.356101.1777. eCollection 2021 Nov.

Abstract

Parasites are among serious health problems that threaten the public health of humans. is considered the second or third most common cause of death among parasitic diseases. The present study was conducted to determine the molecular detection and sequencing of iron-containing superoxide dismutase () genes of . This cross-sectional study was carried out within March-August 2020. Genomic DNA from stool samples was extracted using an AccuPrep® stool DNA Extraction Kit. Afterward, four DNA samples were subjected to sequence alignment analysis of the gene in local human isolated using a Clustal W alignment tool (Mega 6.0).The iron-containing superoxide dismutase gene was present at 62.8% in 15 out of 24 samples. The results of sequence alignment analysis of the gene in local E.histolytica human isolates indicated the number of mutations in each of the 4 isolates. Accordingly, there were 2 (16.66%) silent mutations and 1(6.66%) nonsense mutation. There are a variety of genetic strains of associated with diarrheal illness in Iraqi patients, which are unique to this country.

摘要

寄生虫是威胁人类公共健康的严重健康问题之一。溶组织内阿米巴(Entamoeba histolytica)被认为是寄生虫病中第二或第三大常见死因。本研究旨在确定伊拉克分离的溶组织内阿米巴(E.histolytica)铁结合超氧化物歧化酶()基因的分子检测和测序。这项横断面研究于 2020 年 3 月至 8 月进行。使用 AccuPrep®粪便 DNA 提取试剂盒从粪便样本中提取基因组 DNA。然后,使用 Clustal W 对齐工具(Mega 6.0)对 4 个 DNA 样本进行局部分离的人类中 的基因序列比对分析。在 24 个样本中的 15 个样本中存在含铁超氧化物歧化酶基因,占 62.8%。对本地 E.histolytica 人类分离株中 基因的序列比对分析结果表明,4 个分离株中的每个分离株都存在突变。因此,有 2 个(16.66%)沉默突变和 1 个(6.66%)无义突变。在伊拉克患者中,与腹泻病相关的 有多种遗传株系,这是该国特有的。

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