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盐生植物(Pall.)Moq.(荒漠草原优势物种)的完整叶绿体基因组

The complete chloroplast genome of halophyte (Pall.) Moq., a dominant species of desert grassland.

作者信息

Wang Jingru, Wu Shuang, Wang Minghao

机构信息

School of Environmental Engineering, Xuzhou University of Technology, Xuzhou, China.

State Key Laboratory of Grassland Agro-Ecosystems, Institute of Innovation Ecology & School of Life Sciences, Lanzhou University, Lanzhou, China.

出版信息

Mitochondrial DNA B Resour. 2022 Mar 25;7(3):544-545. doi: 10.1080/23802359.2022.2054379. eCollection 2022.

DOI:10.1080/23802359.2022.2054379
PMID:35356794
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8959530/
Abstract

(Pall.) Moq. is a dominant halophyte species of the desert ecosystem mainly distributed in Southeast Europe and Northwest Asia, and used as a major forage grass. Here, we report its complete chloroplast genome, assembled from the whole-genome resequencing data. The circular genome of is 153,773 bp in length, including a typical quadripartite structure consisting of a pair of inverted repeats (IRs; 24,991 bp) separated by large single-copy (LSC; 84,781 bp) and small single-copy (SSC; 19,010 bp) regions. The total GC content is 36.3%, and a total of 129 genes are annotated, including 84 protein-coding genes, 37 tRNAs, and eight rRNAs. The phylogenetic analysis has shown that is positioned as a sister taxon to the two species, all belonging to the same tribe, Salicornieae.

摘要

(帕氏)莫克是沙漠生态系统中的一种优势盐生植物物种,主要分布在欧洲东南部和亚洲西北部,并被用作主要牧草。在此,我们报告了从全基因组重测序数据组装得到的其完整叶绿体基因组。该环状基因组长度为153,773 bp,包括一个典型的四分体结构,由一对反向重复序列(IRs;24,991 bp)组成,被大单拷贝(LSC;84,781 bp)和小单拷贝(SSC;19,010 bp)区域隔开。总GC含量为36.3%,共注释了129个基因,包括84个蛋白质编码基因、37个tRNA和8个rRNA。系统发育分析表明,该物种被定位为两个碱蓬属物种的姐妹分类群,它们都属于同一族,即盐角草族。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d01b/8959530/183032d227ea/TMDN_A_2054379_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d01b/8959530/183032d227ea/TMDN_A_2054379_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d01b/8959530/183032d227ea/TMDN_A_2054379_F0001_B.jpg

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