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通过“环融合”策略发现苯并[d]异噻唑衍生物作为靶向程序性细胞死亡蛋白1/程序性细胞死亡配体1(PD-1/PD-L1)相互作用的新型支架抑制剂。

Discovery of benzo[d]isothiazole derivatives as novel scaffold inhibitors targeting the programmed cell death-1/programmed cell death-ligand 1 (PD-1/PD-L1) interaction through "ring fusion" strategy.

作者信息

Gao Yinli, Wang Hanxun, Shen Lanlan, Xu Hanqing, Deng Minghui, Cheng Maosheng, Wang Jian

机构信息

School of Pharmaceutical Engineering, Shenyang Pharmaceutical University, Shenyang 110016, Liaoning, P. R. China; Key Laboratory of Structure-Based Drug Design & Discovery, Ministry of Education, Shenyang Pharmaceutical University, Shenyang 110016, Liaoning, P. R. China; Key Laboratory of Intelligent Drug Design and New Drug Discovery of Liaoning Province, Shenyang Pharmaceutical University, Shenyang 110016, Liaoning, P. R. China.

School of Pharmaceutical Engineering, Shenyang Pharmaceutical University, Shenyang 110016, Liaoning, P. R. China; Key Laboratory of Structure-Based Drug Design & Discovery, Ministry of Education, Shenyang Pharmaceutical University, Shenyang 110016, Liaoning, P. R. China; Key Laboratory of Intelligent Drug Design and New Drug Discovery of Liaoning Province, Shenyang Pharmaceutical University, Shenyang 110016, Liaoning, P. R. China.

出版信息

Bioorg Chem. 2022 Jun;123:105769. doi: 10.1016/j.bioorg.2022.105769. Epub 2022 Apr 4.

Abstract

The inhibition of programmed cell death-1/programmed cell death-ligand 1 (PD-1/PD-L1) interaction by monoclonal antibodies (mAbs) has achieved promising outcomes in cancer immunotherapy. Due to the inherent deficiencies of mAbs drugs, such as high cost of treatment, immunogenicity, poor pharmacokinetics and penetration of solid tumors, researchers are encouraged to develop small molecule inhibitors, to overcome mAbs drugs' deficiencies and change the situation where small molecule drugs are not available on the market. Herein, we reported a series of benzo[d]isothiazole derivatives targeting the PD-1/PD-L1 interaction through "ring fusion" strategy using BMS-202 as a starting point. Among them, compound D7 exhibited the best inhibitory activity with an IC value of 5.7 nM by homogeneous time-resolved fluorescence (HTRF) binding assay. In immunotoxicity analysis, D7 showed low cytotoxicity to Jurkat T cells in CCK-8 assay compared to BMS-202. The binding mode between D7 and PD-L1 protein was explored by molecular docking and molecular dynamics (MD) simulations, which revealed crucial chemical groups, such as biphenyl group interacting with Ile54, Tyr56, Met115, Ala121, Ile54, Met115, Ala121 and Tyr123 by hydrophobic interactions, bromobenzene moiety forming π-π stacking interaction with Tyr56, as well as l-serine moiety forming hydrogen bond (H-bond) and salt bridge interactions with Asp122 and Lys124. Furthermore, molecular modeling studies showed that D7 is likely to bind to the FA8 (fatty acid 8) binding site of human serum albumin (HSA). Taken together, D7 significantly inhibits the PD-1/PD-L1 interaction with low cytotoxicity, indicating that D7 is a promising starting point for further drug development in cancer immunotherapy.

摘要

单克隆抗体(mAbs)对程序性细胞死亡蛋白1/程序性细胞死亡配体1(PD-1/PD-L1)相互作用的抑制在癌症免疫治疗中取得了令人瞩目的成果。由于单克隆抗体药物存在固有的缺陷,如治疗成本高、免疫原性、药代动力学差以及实体瘤穿透性不佳等问题,研究人员受到鼓舞去开发小分子抑制剂,以克服单克隆抗体药物的缺陷,并改变市场上缺乏小分子药物的局面。在此,我们报道了一系列以BMS-202为起始点,通过“环融合”策略靶向PD-1/PD-L1相互作用的苯并[d]异噻唑衍生物。其中,化合物D7通过均相时间分辨荧光(HTRF)结合试验显示出最佳的抑制活性,IC值为5.7 nM。在免疫毒性分析中,与BMS-202相比,D7在CCK-8试验中对Jurkat T细胞显示出较低的细胞毒性。通过分子对接和分子动力学(MD)模拟探索了D7与PD-L1蛋白之间的结合模式,结果表明关键化学基团,如联苯基团通过疏水相互作用与Ile54、Tyr56、Met115、Ala121、Ile54、Met115、Ala121和Tyr123相互作用,溴苯部分与Tyr56形成π-π堆积相互作用,以及L-丝氨酸部分与Asp122和Lys124形成氢键(H键)和盐桥相互作用。此外,分子模拟研究表明D7可能与人血清白蛋白(HSA)的FA8(脂肪酸8)结合位点结合。综上所述,D7以低细胞毒性显著抑制PD-1/PD-L1相互作用,表明D7是癌症免疫治疗中进一步药物开发的一个有前景的起始点。

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