• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

软件辅助的中药多层面质谱化合物鉴定:以实例说明。

Software Assisted Multi-Tiered Mass Spectrometry Identification of Compounds in Traditional Chinese Medicine: as an Example.

机构信息

National Engineering Research Center of TCM Standardization Technology, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 501 Haike Road, Shanghai 201203, China.

School of Pharmaceutical Sciences, University of Chinese Academy of Sciences, No. 19A Yuquan Road, Beijing 100049, China.

出版信息

Molecules. 2022 Apr 4;27(7):2333. doi: 10.3390/molecules27072333.

DOI:10.3390/molecules27072333
PMID:35408733
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9000885/
Abstract

The complexity of metabolites in traditional Chinese medicine (TCM) hinders the comprehensive profiling and accurate identification of metabolites. In this study, an approach that integrates enhanced column separation, mass spectrometry post-processing and result verification was proposed and applied in the identification of flavonoids in . Firstly, column chromatography fractionation, followed by liquid chromatography-tandem mass spectrometry was used for systematic separation and detection. Secondly, a three-level data post-processing method was applied to the identification of flavonoids. Finally, fragmentation rules were used to verify the flavonoid compounds. As a result, a total of 197 flavonoids were characterized in , among which seven compounds were unambiguously identified in level 1, 80 compounds were tentatively identified by MS-DIAL and Compound Discoverer in level 2a, 95 compounds were annotated by Compound discoverer and Peogenesis QI in level 2b, and 15 compounds were exclusively annotated by using SIRIUS software in level 3. This study provides an approach for the rapid and efficient identification of the majority of components in herbal medicines.

摘要

中药(TCM)代谢物的复杂性阻碍了代谢物的全面分析和准确鉴定。本研究提出了一种整合增强柱分离、质谱后处理和结果验证的方法,并应用于. 中的黄酮类化合物的鉴定。首先,采用柱层析分离,然后进行液相色谱-串联质谱进行系统分离和检测。其次,应用三级数据后处理方法对黄酮类化合物进行鉴定。最后,利用裂解规律对黄酮类化合物进行验证。结果,在. 中鉴定出 197 种黄酮类化合物,其中有 7 种化合物在 1 级中得到明确鉴定,80 种化合物在 2a 级中通过 MS-DIAL 和 Compound Discoverer 进行了初步鉴定,95 种化合物在 2b 级中通过 Compound Discoverer 和 Peogenesis QI 进行了注释,15 种化合物在 3 级中通过使用 Sirius 软件进行了专门的注释。本研究为中草药中大多数成分的快速、高效鉴定提供了一种方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f933/9000885/2ae3e6c12153/molecules-27-02333-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f933/9000885/3c227c29136e/molecules-27-02333-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f933/9000885/b478621e1df9/molecules-27-02333-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f933/9000885/bf8a07fb2b81/molecules-27-02333-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f933/9000885/32a1d019a673/molecules-27-02333-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f933/9000885/aec4ae5038a7/molecules-27-02333-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f933/9000885/2ae3e6c12153/molecules-27-02333-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f933/9000885/3c227c29136e/molecules-27-02333-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f933/9000885/b478621e1df9/molecules-27-02333-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f933/9000885/bf8a07fb2b81/molecules-27-02333-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f933/9000885/32a1d019a673/molecules-27-02333-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f933/9000885/aec4ae5038a7/molecules-27-02333-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f933/9000885/2ae3e6c12153/molecules-27-02333-g006.jpg

相似文献

1
Software Assisted Multi-Tiered Mass Spectrometry Identification of Compounds in Traditional Chinese Medicine: as an Example.软件辅助的中药多层面质谱化合物鉴定:以实例说明。
Molecules. 2022 Apr 4;27(7):2333. doi: 10.3390/molecules27072333.
2
Analysis of Flavonoids in by Ultra-Performance Liquid Chromatography with Tandem Mass Spectrometry.采用超高效液相色谱-串联质谱法分析 中的类黄酮。
Molecules. 2020 Jan 17;25(2):389. doi: 10.3390/molecules25020389.
3
Quality markers based on phytochemical analysis and anti-inflammatory screening: An integrated strategy for the quality control of Dalbergia odorifera by UHPLC-Q-Orbitrap HRMS.基于植物化学分析和抗炎筛选的质量标志物:UHPLC-Q-Orbitrap HRMS 用于降香的质量控制的综合策略。
Phytomedicine. 2021 Apr;84:153511. doi: 10.1016/j.phymed.2021.153511. Epub 2021 Feb 12.
4
Rapid identification of chemical components and screening of acetylcholinesterase inhibitors from Dalbergia odorifera based on mass defect and diagnostic ion filtering strategy, affinity ultrafiltration, and liquid chromatography-tandem mass spectrometry.基于质荷比偏差和特征离子过滤策略、亲和超滤和液相色谱-串联质谱法,从降香中快速鉴定化学成分并筛选乙酰胆碱酯酶抑制剂。
J Sep Sci. 2024 Jul;47(14):e2400288. doi: 10.1002/jssc.202400288.
5
Simultaneous determination of 10 major flavonoids in Dalbergia odorifera by high performance liquid chromatography.高效液相色谱法同时测定降香中10种主要黄酮类成分
J Pharm Biomed Anal. 2005 Sep 15;39(3-4):469-76. doi: 10.1016/j.jpba.2005.04.007.
6
Dalbergia odorifera: A review of its traditional uses, phytochemistry, pharmacology, and quality control.降香黄檀:传统用途、植物化学、药理学和质量控制的综述。
J Ethnopharmacol. 2020 Feb 10;248:112328. doi: 10.1016/j.jep.2019.112328. Epub 2019 Oct 22.
7
Purification of compounds from Lignum Dalbergia Odorifera using two-dimensional preparative chromatography with Click oligo (ethylene glycol) and C18 column.采用 Click 寡聚(乙二醇)和 C18 柱二维制备色谱法从降香黄檀中分离化合物。
J Sep Sci. 2011 Feb;34(3):299-307. doi: 10.1002/jssc.201000609. Epub 2011 Jan 7.
8
Liquid chromatography/electrospray ionization mass spectrometry for the characterization of twenty-three flavonoids in the extract of Dalbergia odorifera.液相色谱/电喷雾电离质谱法用于表征降香提取物中的23种黄酮类化合物。
Rapid Commun Mass Spectrom. 2005;19(11):1557-65. doi: 10.1002/rcm.1936.
9
Detection of trace components in Xiangdan injection of Dalbergia odorifera based on microextraction and back-extraction along with bar-form-diagram strategy.基于微萃取和背萃取以及棒状图策略检测降香注射液中的痕量成分。
J Chromatogr A. 2024 May 10;1722:464852. doi: 10.1016/j.chroma.2024.464852. Epub 2024 Mar 27.
10
Selective separation of flavonoid glycosides in Dalbergia odorifera by matrix solid-phase dispersion using titania.采用 TiO2 基质固相分散法从降香黄檀中选择性分离黄酮苷。
J Sep Sci. 2011 Jun;34(11):1347-54. doi: 10.1002/jssc.201100024. Epub 2011 Apr 13.

引用本文的文献

1
Comparison of data processing strategies using commercial vs. open-source software in GC-Orbitrap-HRMS untargeted metabolomics analysis for food authentication: thyme geographical differentiation and marker identification as a case study.使用商业软件与开源软件进行 GC-Orbitrap-HRMS 非靶向代谢组学分析处理数据策略的比较:百里香的地理差异和标志物鉴定研究。
Anal Bioanal Chem. 2024 Jul;416(18):4039-4055. doi: 10.1007/s00216-024-05347-0. Epub 2024 May 28.
2
Strawberry cv. Festival: A Polyphenol-Based Phytochemical Characterization in Fruit and Leaf Extracts.草莓品种 Festival:果实和叶提取物中基于多酚的植物化学特征。
Molecules. 2023 Feb 16;28(4):1865. doi: 10.3390/molecules28041865.
3

本文引用的文献

1
Spectral entropy outperforms MS/MS dot product similarity for small-molecule compound identification.光谱熵在小分子化合物鉴定方面优于 MS/MS 点积相似度。
Nat Methods. 2021 Dec;18(12):1524-1531. doi: 10.1038/s41592-021-01331-z. Epub 2021 Dec 2.
2
Integrated analysis of the chemical-material basis and molecular mechanisms for the classic herbal formula of Lily Bulb and Rehmannia Decoction in alleviating depression.百合地黄汤经典中药复方抗抑郁的化学物质基础及分子机制的整合分析
Chin Med. 2021 Oct 21;16(1):107. doi: 10.1186/s13020-021-00519-x.
3
De novo molecular design and generative models.
Metabolomic Strategy to Characterize the Profile of Secondary Metabolites in DL1011 Regulated by Chemical Epigenetic Agents.
代谢组学策略分析化学表观遗传试剂调控下 DL1011 中次生代谢产物的特征。
Molecules. 2022 Dec 26;28(1):218. doi: 10.3390/molecules28010218.
从头分子设计与生成模型。
Drug Discov Today. 2021 Nov;26(11):2707-2715. doi: 10.1016/j.drudis.2021.05.019. Epub 2021 Jun 1.
4
Public LC-Orbitrap Tandem Mass Spectral Library for Metabolite Identification.公共 LC-Orbitrap 串联质谱代谢物鉴定文库。
J Proteome Res. 2021 Apr 2;20(4):2089-2097. doi: 10.1021/acs.jproteome.0c00930. Epub 2021 Feb 2.
5
Investigation of the chemical compounds in Pheretima aspergillum (E. Perrier) using a combination of mass spectral molecular networking and unsupervised substructure annotation topic modeling together with in silico fragmentation prediction.结合质谱分子网络和无监督子结构注释主题建模以及计算机辅助碎片预测,对参环毛蚓中的化合物进行研究。
J Pharm Biomed Anal. 2020 May 30;184:113197. doi: 10.1016/j.jpba.2020.113197. Epub 2020 Feb 20.
6
De Novo Molecular Formula Annotation and Structure Elucidation Using SIRIUS 4.基于 SIRIUS 4 的从头分子公式注释与结构解析。
Methods Mol Biol. 2020;2104:185-207. doi: 10.1007/978-1-0716-0239-3_11.
7
Beyond mass spectrometry, the next step in proteomics.超越质谱法,蛋白质组学的下一步。
Sci Adv. 2020 Jan 10;6(2):eaax8978. doi: 10.1126/sciadv.aax8978. eCollection 2020 Jan.
8
A new software-assisted analytical workflow based on high-resolution mass spectrometry for the systematic study of phenolic compounds in complex matrices.基于高分辨质谱的新型软件辅助分析工作流程,用于复杂基质中酚类化合物的系统研究。
Talanta. 2020 Mar 1;209:120573. doi: 10.1016/j.talanta.2019.120573. Epub 2019 Nov 18.
9
Metabolomics reveals diet-derived plant polyphenols accumulate in physiological bone.代谢组学揭示了饮食来源的植物多酚在生理骨骼中积累。
Sci Rep. 2019 May 29;9(1):8047. doi: 10.1038/s41598-019-44390-1.
10
A cheminformatics approach to characterize metabolomes in stable-isotope-labeled organisms.一种用于表征稳定同位素标记生物代谢组的化学信息学方法。
Nat Methods. 2019 Apr;16(4):295-298. doi: 10.1038/s41592-019-0358-2. Epub 2019 Mar 28.