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核糖体RNA扩展片段的故事:在多样性中寻找功能。

The story of rRNA expansion segments: Finding functionality amidst diversity.

作者信息

Hariharan Nivedita, Ghosh Sumana, Palakodeti Dasaradhi

机构信息

Technologies for the Advancement of Science, Institute for Stem Cell Science and Regenerative Medicine (inStem), Bangalore, India.

The University of Trans-disciplinary Health Sciences and Technology, Bangalore, India.

出版信息

Wiley Interdiscip Rev RNA. 2023 Jan;14(1):e1732. doi: 10.1002/wrna.1732. Epub 2022 Apr 15.

Abstract

Expansion segments (ESs) are multinucleotide insertions present across phyla at specific conserved positions in eukaryotic rRNAs. ESs are generally absent in bacterial rRNAs with some exceptions, while the archaeal rRNAs have microexpansions at regions that coincide with those of eukaryotic ESs. Although there is an increasing prominence of ribosomes, especially the ribosomal proteins, in fine-tuning gene expression through translation regulation, the role of rRNA ESs is relatively underexplored. While rRNAs have been established as the major catalytic hub in ribosome function, the presence of ESs widens their scope as a species-specific regulatory hub of protein synthesis. In this comprehensive review, we have elaborately discussed the current understanding of the functional aspects of rRNA ESs of cytoplasmic eukaryotic ribosomes and discuss their past, present, and future. This article is categorized under: RNA Structure and Dynamics > Influence of RNA Structure in Biological Systems Translation > Ribosome Structure/Function Translation > Regulation.

摘要

扩展片段(ESs)是多核苷酸插入序列,存在于真核生物rRNA特定保守位置的各个门中。细菌rRNA一般不存在ESs,但有一些例外,而古细菌rRNA在与真核生物ESs区域重合的部位有微扩展。尽管核糖体,尤其是核糖体蛋白,在通过翻译调控微调基因表达方面的重要性日益凸显,但rRNA ESs的作用相对未得到充分探索。虽然rRNA已被确立为核糖体功能的主要催化中心,但ESs的存在拓宽了其作为蛋白质合成的物种特异性调控中心的范畴。在这篇全面综述中,我们详细讨论了目前对细胞质真核生物核糖体rRNA ESs功能方面的理解,并探讨了它们的过去、现在和未来。本文分类如下:RNA结构与动力学>RNA结构在生物系统中的影响;翻译>核糖体结构/功能;翻译>调控

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