Institute of Biochemistry, Heinrich Heine University, Düsseldorf, Germany.
Department of Biochemistry, University of Cambridge, Cambridge, UK.
Bioessays. 2022 Jul;44(7):e2200035. doi: 10.1002/bies.202200035. Epub 2022 Apr 22.
In all domains of life, transmembrane proteins from the ATP-binding cassette (ABC) transporter family drive the translocation of diverse substances across lipid bilayers. In pathogenic fungi, the ABC transporters of the pleiotropic drug resistance (PDR) subfamily confer antibiotic resistance and so are of interest as therapeutic targets. They also drive the quest for understanding how ABC transporters can generally accommodate such a wide range of substrates. The Pdr5 transporter from baker's yeast is representative of the PDR group and, ever since its discovery more than 30 years ago, has been the subject of extensive functional analyses. A new perspective of these studies has been recently provided in the framework of the first electron cryo-microscopy structures of Pdr5, as well as emergent applications of machine learning in the field. Taken together, the old and the new developments have been used to propose a mechanism for the transport process in PDR proteins. This mechanism involves a "flippase" step that moves the substrates from one leaflet of the bilayer to the other, as a central element of cellular efflux.
在所有生命领域中,ATP 结合盒(ABC)转运蛋白家族的跨膜蛋白驱动各种物质在脂质双层之间的转运。在致病真菌中,多药耐药性(PDR)亚家族的 ABC 转运蛋白赋予抗生素耐药性,因此作为治疗靶点具有重要意义。它们还推动了人们对 ABC 转运蛋白如何能够普遍适应如此广泛的底物的理解。来自面包酵母的 Pdr5 转运蛋白是 PDR 家族的代表,自 30 多年前发现以来,它一直是广泛功能分析的主题。最近,在 Pdr5 的第一个电子冷冻显微镜结构的框架内,以及机器学习在该领域的新兴应用,为这些研究提供了一个新的视角。总之,旧的和新的发展都被用来提出 PDR 蛋白运输过程的机制。该机制涉及一个“翻转酶”步骤,将底物从双层的一个叶层转移到另一个叶层,作为细胞外排的核心元件。