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槲皮苷对伪狂犬病病毒诱导的3D4/2细胞活性氧分泌的影响及lncRNA调控靶点预测

Effects of Quercitrin on PRV-Induced Secretion of Reactive Oxygen Species and Prediction of lncRNA Regulatory Targets in 3D4/2 Cells.

作者信息

Wang Qiuhua, Xie Xiaodong, Chen Qi, Yi Shouli, Chen Jiaji, Xiao Qi, Yu Meiling, Wei Yingyi, Hu Tingjun

机构信息

College of Animal Science and Technology, Guangxi University, Nanning 530005, China.

出版信息

Antioxidants (Basel). 2022 Mar 25;11(4):631. doi: 10.3390/antiox11040631.

Abstract

Quercitrin is a kind of flavonoid that is found in many plants; it has good antioxidant activity, and can regulate oxidative stress induced by Pseudorabies virus (PRV)-infected cells. In this study, the secretion of reactive oxygen species (ROS) induced by PRV infection was detected by flow cytometry, and RNA expression profiles of the 3D4/2 cells were produced and analyzed by sequenced GO (Gene Ontology) and KEGG (Kyoto Encyclopedia of Genes and Genomes); the sequencing results were verified by RT-qCR. The results showed that the secretion of ROS induced by PRV infection in 3D4/2 cells could be significantly decreased by quercitrin. The differentially expressed 1055 mRNA, 867 lncRNA, 99 miRNA, and 69 circRNA were detected between the control group and the PRV infection group. The differentially expressed 1202 mRNA, 785 lncRNA, 115 miRNA, and 79 circRNA were found between the PRV+ quercitrin group and the control group. The differentially expressed 357 mRNA, 69 lncRNA, 111 miRNA, and 81 circRNA were obtained between the PRV+ quercitrin group and the PRV group. The significantly differentially expressed mRNAs were mainly involved in cell metabolism, regulatory protein phosphorylation, protein phosphorylation, antioxidation, regulatory phosphorylation, and so on. Among them, the mRNAs related to antioxidant response and oxidative stress were thioredoxin-interacting protein (TXNIP) and nitric oxide synthase 2 (NOS2). According to the network diagram of lncRNA-miRNA-mRNA, two targeted miRNA (ssc-miR-450c-3p and novel-m0400-3p) relationships with TXNIP and NOS2 were screened. This study provides a scientific foundation for further research for the function of quercitrin in anti-virus-induced oxidative stress.

摘要

槲皮苷是一种存在于许多植物中的黄酮类化合物;它具有良好的抗氧化活性,并且能够调节由伪狂犬病病毒(PRV)感染细胞所诱导的氧化应激。在本研究中,通过流式细胞术检测PRV感染所诱导的活性氧(ROS)分泌情况,并通过测序基因本体论(GO)和京都基因与基因组百科全书(KEGG)对3D4/2细胞的RNA表达谱进行生成及分析;测序结果通过逆转录定量聚合酶链反应(RT-qCR)进行验证。结果显示,槲皮苷可显著降低PRV感染在3D4/2细胞中所诱导的ROS分泌。在对照组和PRV感染组之间检测到1055个差异表达的mRNA、867个长链非编码RNA(lncRNA)、99个微小RNA(miRNA)和69个环状RNA(circRNA)。在PRV+槲皮苷组和对照组之间发现1202个差异表达的mRNA、785个lncRNA、115个miRNA和79个circRNA。在PRV+槲皮苷组和PRV组之间获得357个差异表达的mRNA、69个lncRNA、111个miRNA和81个circRNA。显著差异表达的mRNA主要参与细胞代谢、调节蛋白磷酸化、蛋白磷酸化、抗氧化、调节磷酸化等过程。其中,与抗氧化反应和氧化应激相关的mRNA是硫氧还蛋白相互作用蛋白(TXNIP)和一氧化氮合酶2(NOS2)。根据lncRNA-miRNA-mRNA网络图,筛选出两个与TXNIP和NOS2相关的靶向miRNA(ssc-miR-450c-3p和novel-m0400-3p)关系。本研究为进一步研究槲皮苷在抗病毒诱导的氧化应激中的功能提供了科学依据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ea32/9031018/1ad245e42dd3/antioxidants-11-00631-g001.jpg

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