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天然产物蛇床子素及其衍生物抗炎活性的计算筛选

Computational Screening of the Natural Product Osthole and Its Derivates for Anti-Inflammatory Activity.

作者信息

Mosebarger Angela, Reddi Rambabu N, Menon Ramkumar, Kammala Ananth Kumar

机构信息

Division of Basic & Translational Research, Department of Obstetrics & Gynecology, The University of Texas Medical Branch at Galveston, 301 University Blvd., Galveston, TX 77555, USA.

Department of Organic Chemistry, Weizmann Institute of Science, Rehovot, 234 Herzl St., P.O. Box 26, Rehovot 7610001, Israel.

出版信息

Life (Basel). 2022 Mar 30;12(4):505. doi: 10.3390/life12040505.

Abstract

Osthole (OS) is a natural coumarin with a long history of medicinal use in a variety of diseases, such as itch and menstrual disorders. In recent years, OS has been shown to treat inflammation and reduce the expression and activity of NF-κB, although its mechanism of action is still unclear. Overexpression of inflammatory cytokines can have many negative effects in the body, including inducing preterm labor; thus, the modulation of inflammation by OS and its derivatives may be able to delay preterm birth, increasing neonatal survival rates. The objectives of this study were to screen and identify the derivatives of OS with the highest potential for binding capacity to inflammatory mediators NF-κB, TNF-α, and ERK1, and to measure the drug-like properties of these compounds. GLIDE docking in Schrodinger Maestro software was used to calculate docking scores for a variety of semi-synthetic OS derivatives against three proteins involved in inflammation: NF-κB, TNF-α, and ERK1. Schrodinger Qikprop was also used to measure the pharmaceutically relevant properties of the compounds. The protonated demethoxy osthole showed the highest docking of all the proteins tested, while the deprotonated demethoxy osthole consistently had the lowest scores, denoting the importance of pH in the binding activity of this derivative. The lowest docking was at NF-κB, suggesting that this is less likely to be the primary target of OS. All of the screened derivatives showed high drug potential, based on their Qikprop properties. OS and its derivatives showed potential to bind to multiple proteins that regulate the inflammatory response and are prospective candidates for delaying preterm birth.

摘要

蛇床子素(OS)是一种天然香豆素,在治疗多种疾病(如瘙痒和月经紊乱)方面有着悠久的药用历史。近年来,已证明OS可治疗炎症并降低核因子-κB(NF-κB)的表达和活性,但其作用机制仍不清楚。炎症细胞因子的过度表达会在体内产生许多负面影响,包括诱发早产;因此,OS及其衍生物对炎症的调节可能能够延迟早产,提高新生儿存活率。本研究的目的是筛选和鉴定与炎症介质NF-κB、肿瘤坏死因子-α(TNF-α)和细胞外信号调节激酶1(ERK1)结合能力潜力最高的OS衍生物,并测定这些化合物的类药性质。使用Schrodinger Maestro软件中的GLIDE对接程序计算多种半合成OS衍生物与三种炎症相关蛋白(NF-κB、TNF-α和ERK1)的对接分数。还使用Schrodinger Qikprop测定化合物的药学相关性质。质子化的去甲氧基蛇床子素在所有测试蛋白中显示出最高的对接分数,而去质子化的去甲氧基蛇床子素分数始终最低,这表明pH值对该衍生物的结合活性很重要。最低对接分数出现在NF-κB上,表明其不太可能是OS的主要靶点。基于Qikprop性质,所有筛选出的衍生物均显示出较高的药物潜力。OS及其衍生物显示出与多种调节炎症反应的蛋白结合的潜力,是延迟早产的潜在候选物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6da1/9030959/a999110cdd04/life-12-00505-g001.jpg

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