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从三名子宫内膜癌患者获取的肿瘤标本中体细胞线粒体DNA突变、异质性及连环体水平升高的鉴定

Identification of Somatic Mitochondrial DNA Mutations, Heteroplasmy, and Increased Levels of Catenanes in Tumor Specimens Obtained from Three Endometrial Cancer Patients.

作者信息

Young Matthew J, Sachidanandam Ravi, Hales Dale B, Brard Laurent, Robinson Kathy, Rahman Md Mostafijur, Khadka Pabitra, Groesch Kathleen, Young Carolyn K J

机构信息

Department of Biochemistry & Molecular Biology, Southern Illinois University School of Medicine, Carbondale, IL 62901, USA.

Simmons Cancer Institute, Southern Illinois University School of Medicine, Springfield, IL 62702, USA.

出版信息

Life (Basel). 2022 Apr 9;12(4):562. doi: 10.3390/life12040562.

Abstract

Endometrial carcinoma (EC) is the most common type of gynecologic malignant epithelial tumor, with the death rate from this disease doubling over the past 20 years. Mitochondria provide cancer cells with necessary anabolic building blocks such as amino acids, lipids, and nucleotides, and EC samples have been shown to increase mitochondrial biogenesis. In cancer, mitochondrial DNA (mtDNA) heteroplasmy studies suggest that heteroplasmic variants encode predicted pathogenic proteins. We investigated the mtDNA genotypes within peri-normal and tumor specimens obtained from three individuals diagnosed with EC. DNA extracts from peri-normal and tumor tissues were used for mtDNA-specific next-generation sequencing and analyses of mtDNA content and topoisomers. The three tumors harbor heteroplasmic somatic mutations, and at least one mutation in each carcinoma is predicted to deleteriously alter a mtDNA-encoded protein. Somatic heteroplasmy linked to two mtDNA tRNA genes was found in separate tumors, and two heteroplasmic non-coding variants were identified in a single EC tumor. While two tumors had altered mtDNA content, all three displayed increased mtDNA catenanes. Our findings support that EC cells require wild-type mtDNA, but heteroplasmic mutations may alter mitochondrial metabolism to help promote cancer cell growth and proliferation.

摘要

子宫内膜癌(EC)是最常见的妇科恶性上皮性肿瘤,在过去20年中,该疾病的死亡率翻了一番。线粒体为癌细胞提供必需的合成代谢构件,如氨基酸、脂质和核苷酸,并且已证明EC样本中线粒体生物发生增加。在癌症中,线粒体DNA(mtDNA)异质性研究表明,异质性变体编码预测的致病蛋白。我们研究了从三名被诊断为EC的个体获得的围正常和肿瘤标本中的mtDNA基因型。围正常和肿瘤组织的DNA提取物用于mtDNA特异性下一代测序以及mtDNA含量和拓扑异构体分析。这三个肿瘤存在异质性体细胞突变,并且每个癌中至少有一个突变预计会有害地改变mtDNA编码的蛋白质。在不同的肿瘤中发现了与两个mtDNA tRNA基因相关的体细胞异质性,并且在单个EC肿瘤中鉴定出两个异质性非编码变体。虽然两个肿瘤的mtDNA含量发生了改变,但所有三个肿瘤的mtDNA连环体均增加。我们的研究结果支持EC细胞需要野生型mtDNA,但异质性突变可能会改变线粒体代谢,从而有助于促进癌细胞的生长和增殖。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fe9/9030153/27c151b97b7b/life-12-00562-g001.jpg

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