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基于金胺 O 区分荧光发射的无标记 DNA 酶用于目标触发的催化裂解反应,实现对真实样本中多种生物分子的高灵敏检测。

Label-free DNAzyme for highly sensitive detection of multiple biomolecules in real samples through target-triggered catalytic cleavage reactions with auramine O's discriminated fluorescence emission.

机构信息

Department of Chemistry, SRM Institute of Science and Technology, Kattankulathur, 603203, Tamil Nadu, India.

出版信息

Anal Bioanal Chem. 2022 Jun;414(14):4021-4037. doi: 10.1007/s00216-022-04061-z. Epub 2022 Apr 23.

DOI:10.1007/s00216-022-04061-z
PMID:35461387
Abstract

A universal enzyme strand (E-DNA) recyclable L-histidine (L-His), melamine (MA), and cisplatin (CP) biosensor was fabricated on the basis of a target-specific RNA-cleaving DNAzyme with specific auramine O (AuO) dye instead of thioflavin T. In this strategy, the substrate strand (S-DNA) of the RNA-cleaving site was constructed as an intramolecular stem-loop structure, and a GT-rich sequence was imprisoned in the double-stranded stem which inhibits the formation of stable G-quadruplex (G4cpx) with AuO. The presence of L-His initiates a catalytic reaction for cleaving the RNA site of the S-DNA hydrolytically releasing the GT-rich portion, which subsequently combines with AuO and forms a G4cpx for enhanced fluorescent signal. The subsequent addition of MA uncoils the G4cpx to form T-MA-T dsDNA, or addition of CP unwound the G4cpx to form CP-DNA leading to an intensive decrease of AuO emission. Remarkably, the liberated L-His can ultimately cause several rounds of cleavage, and the liberated E-DNA can catalyze the subsequent reaction with the other S-DNA. The use of L-His and E-DNA repeatedly induces S-DNA cleavage and intensifies the emission signal. The results show that the proposed biosensor is extremely sensitive to L-His, MA, and CP with a detection limit of 0.98, 10, and 3.4 nM respectively. To the best of our knowledge, the utilization of AuO as the G4cpx inducer and stabilizer for L-His, MA, and CP detection in real milk and urine samples has never been reported.

摘要

基于具有特定金胺 O(AuO)染料而非硫黄素 T 的靶标特异性 RNA 切割 DNA 酶,制备了一种通用酶链(E-DNA)可回收 L-组氨酸(L-His)、三聚氰胺(MA)和顺铂(CP)生物传感器。在该策略中,RNA 切割位点的底物链(S-DNA)构建为分子内茎环结构,富含 GT 的序列被囚禁在双链茎中,这抑制了与 AuO 形成稳定的 G-四链体(G4cpx)。L-His 的存在引发了用于水解 S-DNA 的 RNA 位点的催化反应,从而释放富含 GT 的部分,随后该部分与 AuO 结合并形成 G4cpx 以增强荧光信号。随后加入 MA 解旋 G4cpx 形成 T-MA-T dsDNA,或加入 CP 解开 G4cpx 形成 CP-DNA 导致 AuO 发射强度显著降低。值得注意的是,释放的 L-His 最终可以引发几轮切割,并且释放的 E-DNA 可以催化与其他 S-DNA 的后续反应。L-His 和 E-DNA 的重复使用引发 S-DNA 切割并增强发射信号。结果表明,该生物传感器对 L-His、MA 和 CP 具有极高的灵敏度,检测限分别为 0.98、10 和 3.4 nM。据我们所知,从未有报道将 AuO 用作 G4cpx 诱导剂和稳定剂来检测真实牛奶和尿液样品中的 L-His、MA 和 CP。

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