• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过高通量 RNA-seq 技术对人类分娩时的长非编码 RNA 基因的肌层转录组进行特征分析。

Characterization of the Myometrial Transcriptome of Long Non-coding RNA Genes in Human Labor by High-Throughput RNA-seq.

机构信息

Guangzhou Key Laboratory of Maternal-Fetal Medicine, Guangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou, China.

School of Medicine, South China University of Technology, Guangzhou, China.

出版信息

Reprod Sci. 2022 Oct;29(10):2885-2893. doi: 10.1007/s43032-022-00910-5. Epub 2022 Apr 25.

DOI:10.1007/s43032-022-00910-5
PMID:35467262
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9537226/
Abstract

The contraction of myometrium is pivotal in expelling the fetus and placenta during labor, but the specific mechanism of myometrium changing from quiescent to a contractile state is still unclear. Previous studies have shown that changes in certain genes or proteins are related to the regulation of myometrial contraction, which are considered to be contraction-associated genes. Long non-coding RNAs (lncRNAs) are increasingly recognized as important molecular players in regulating gene expression and many biological processes, but their roles in the rhythmic contraction of myometrial cells during labor remain to be explored. This study aimed to reveal the differentially expressed lncRNAs in the human myometrium of non-labor (NL, n = 9) and in-labor (IL, n = 9). Furthermore, bioinformatic analysis of lncRNA targeted mRNAs was performed to explore the biological processes and pathway alterations during labor. The results showed a total of 112 significantly differentially expressed lncRNAs between two groups were identified, of which 69 were upregulated and 43 were downregulated in IL group, compared with NL group. In addition, the enrichment analysis of Gene Ontology (GO) and pathways showed that the lncRNAs corresponding targeted mRNAs were associated with mRNA splicing, splicesome, ferroptosis, FGFR and NOTCH signaling pathways. Our study constitutes the first report on investigating the gene expression landscape and regulatory mechanism of lncRNAs within laboring and non-laboring myometrium using RNA sequencing (RNA-seq) and bioinformatic analysis. This study provided high-throughput information on the lncRNA in the myometrium of women in labor and those not in labor, to discover novel lncRNA candidates and potential biological pathways involved in human parturition.

摘要

肌层的收缩对于分娩时排出胎儿和胎盘至关重要,但肌层从静止状态转变为收缩状态的具体机制仍不清楚。先前的研究表明,某些基因或蛋白质的变化与肌层收缩的调节有关,这些基因被认为是与收缩相关的基因。长链非编码 RNA(lncRNA)作为调节基因表达和许多生物过程的重要分子调控因子,越来越受到关注,但它们在分娩时肌层细胞有节奏收缩中的作用仍有待探索。本研究旨在揭示非分娩(NL,n=9)和分娩(IL,n=9)人肌层中差异表达的 lncRNA。此外,还对 lncRNA 靶向 mRNA 的生物信息学分析进行了研究,以探讨分娩过程中生物过程和通路的改变。结果显示,两组间共鉴定出 112 个差异表达的 lncRNA,其中 69 个在 IL 组中上调,43 个在 IL 组中下调。此外,基因本体论(GO)和通路的富集分析表明,相应靶向 mRNA 的 lncRNA 与 mRNA 剪接、剪接体、铁死亡、FGFR 和 NOTCH 信号通路有关。本研究首次采用 RNA 测序(RNA-seq)和生物信息学分析,研究了分娩和非分娩肌层中 lncRNA 的基因表达谱和调控机制。该研究为分娩和非分娩妇女肌层中的 lncRNA 提供了高通量信息,有助于发现与人类分娩相关的新的 lncRNA 候选物和潜在的生物学途径。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a24f/9537226/225f6ecd4a28/43032_2022_910_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a24f/9537226/203f8d39eafc/43032_2022_910_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a24f/9537226/ecddb06a1db2/43032_2022_910_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a24f/9537226/ea688884d40b/43032_2022_910_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a24f/9537226/a0a1109d681d/43032_2022_910_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a24f/9537226/da4b28c6bfff/43032_2022_910_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a24f/9537226/225f6ecd4a28/43032_2022_910_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a24f/9537226/203f8d39eafc/43032_2022_910_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a24f/9537226/ecddb06a1db2/43032_2022_910_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a24f/9537226/ea688884d40b/43032_2022_910_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a24f/9537226/a0a1109d681d/43032_2022_910_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a24f/9537226/da4b28c6bfff/43032_2022_910_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a24f/9537226/225f6ecd4a28/43032_2022_910_Fig6_HTML.jpg

相似文献

1
Characterization of the Myometrial Transcriptome of Long Non-coding RNA Genes in Human Labor by High-Throughput RNA-seq.通过高通量 RNA-seq 技术对人类分娩时的长非编码 RNA 基因的肌层转录组进行特征分析。
Reprod Sci. 2022 Oct;29(10):2885-2893. doi: 10.1007/s43032-022-00910-5. Epub 2022 Apr 25.
2
Transcriptome interrogation of human myometrium identifies differentially expressed sense-antisense pairs of protein-coding and long non-coding RNA genes in spontaneous labor at term.对人子宫肌层进行转录组分析,可鉴定足月自然分娩时蛋白质编码基因和长链非编码RNA基因中差异表达的正义-反义基因对。
J Matern Fetal Neonatal Med. 2014 Sep;27(14):1397-408. doi: 10.3109/14767058.2013.860963. Epub 2014 Jan 13.
3
Integrated Proteotranscriptomics of Human Myometrium in Labor Landscape Reveals the Increased Molecular Associated With Inflammation Under Hypoxia Stress.人类分娩肌层整合蛋白质组学研究揭示缺氧应激下与炎症相关的分子变化
Front Immunol. 2021 Oct 4;12:722816. doi: 10.3389/fimmu.2021.722816. eCollection 2021.
4
Comprehensive analysis of lncRNA-miRNA-mRNA networks during osteogenic differentiation of bone marrow mesenchymal stem cells.骨髓间充质干细胞成骨分化过程中 lncRNA-miRNA-mRNA 网络的综合分析。
BMC Genomics. 2022 Jun 7;23(1):425. doi: 10.1186/s12864-022-08646-x.
5
Transcriptome profiling and co-expression network analysis of lncRNAs and mRNAs in colorectal cancer by RNA sequencing.RNA 测序分析结直肠癌中长链非编码 RNA 和信使 RNA 的转录组谱和共表达网络。
BMC Cancer. 2022 Jul 16;22(1):780. doi: 10.1186/s12885-022-09878-6.
6
Transcriptome analysis identified a novel 3-LncRNA regulatory network of transthyretin attenuating glucose induced hRECs dysfunction in diabetic retinopathy.转录组分析确定了一个新的 3-LncRNA 调控网络,该网络可减轻转甲状腺素蛋白在糖尿病视网膜病变中葡萄糖诱导的 hRECs 功能障碍。
BMC Med Genomics. 2019 Oct 15;12(1):134. doi: 10.1186/s12920-019-0596-2.
7
Expression Profiling of lncRNAs, miRNAs, and mRNAs and Their Differential Expression in Leiomyoma Using Next-Generation RNA Sequencing.利用新一代RNA测序技术对长链非编码RNA、微小RNA和信使RNA进行表达谱分析及其在平滑肌瘤中的差异表达
Reprod Sci. 2018 Feb;25(2):246-255. doi: 10.1177/1933719117711265. Epub 2017 Jun 7.
8
Differential long noncoding RNA/mRNA expression profiling and functional network analysis during osteogenic differentiation of human bone marrow mesenchymal stem cells.人骨髓间充质干细胞成骨分化过程中的差异长链非编码RNA/mRNA表达谱及功能网络分析
Stem Cell Res Ther. 2017 Feb 7;8(1):30. doi: 10.1186/s13287-017-0485-6.
9
Transcriptome profiling of lncRNA and co-expression networks in esophageal squamous cell carcinoma by RNA sequencing.通过RNA测序对食管鳞状细胞癌中lncRNA的转录组分析及共表达网络研究
Tumour Biol. 2016 Oct;37(10):13091-13100. doi: 10.1007/s13277-016-5227-3. Epub 2016 Jul 23.
10
Assessment of myometrial transcriptome changes associated with spontaneous human labour by high-throughput RNA-seq.通过高通量 RNA-seq 评估与自发性人类分娩相关的子宫肌层转录组变化。
Exp Physiol. 2014 Mar;99(3):510-24. doi: 10.1113/expphysiol.2013.072868. Epub 2013 Nov 22.

引用本文的文献

1
LncRNA GAS5 Regulates Myometrial Cell Contractions in an m6A-Dependent Manner.长链非编码RNA GAS5以m6A依赖的方式调节子宫肌层细胞收缩。
Function (Oxf). 2025 Mar 24;6(2). doi: 10.1093/function/zqaf009.
2
Characterization and Comparative Analysis of Whole-Transcriptome Sequencing in High- and Low-Fecundity Chongming White Goat Ovaries during the Estrus Phase.发情期高繁殖力和低繁殖力崇明白山羊卵巢全转录组测序的表征及比较分析
Animals (Basel). 2024 Mar 22;14(7):988. doi: 10.3390/ani14070988.
3
Integrating single-cell RNA sequencing with spatial transcriptomics reveals an immune landscape of human myometrium during labour.

本文引用的文献

1
Engineered exosomes for co-delivery of PGM5-AS1 and oxaliplatin to reverse drug resistance in colon cancer.用于共同递送PGM5-AS1和奥沙利铂以逆转结肠癌耐药性的工程化外泌体。
J Cell Physiol. 2022 Jan;237(1):911-933. doi: 10.1002/jcp.30566. Epub 2021 Aug 31.
2
KOBAS-i: intelligent prioritization and exploratory visualization of biological functions for gene enrichment analysis.KOBAS-i:用于基因富集分析的生物学功能智能优先级排序和探索性可视化。
Nucleic Acids Res. 2021 Jul 2;49(W1):W317-W325. doi: 10.1093/nar/gkab447.
3
TBX2, a Novel Regulator of Labour.
单细胞 RNA 测序与空间转录组学的整合揭示了人类分娩时子宫肌的免疫景观。
Clin Transl Med. 2023 Apr;13(4):e1234. doi: 10.1002/ctm2.1234.
TBX2,一种新的分娩调控因子。
Medicina (Kaunas). 2021 May 21;57(6):515. doi: 10.3390/medicina57060515.
4
Molecular signatures of labor and nonlabor myometrium with parsimonious classification from 2 calcium transporter genes.从 2 个钙转运基因精简分类中具有劳动力和非劳动力的肌层分子特征。
JCI Insight. 2021 Jun 8;6(11):148425. doi: 10.1172/jci.insight.148425.
5
Long and short non-coding RNA and radiation response: a review.长链和短链非编码 RNA 与辐射反应:综述。
Transl Res. 2021 Jul;233:162-179. doi: 10.1016/j.trsl.2021.02.005. Epub 2021 Feb 11.
6
RNA in cancer.癌症中的 RNA。
Nat Rev Cancer. 2021 Jan;21(1):22-36. doi: 10.1038/s41568-020-00306-0. Epub 2020 Oct 20.
7
Notch and TLR signaling coordinate monocyte cell fate and inflammation.Notch 和 TLR 信号协调单核细胞的命运和炎症。
Elife. 2020 Jul 29;9:e57007. doi: 10.7554/eLife.57007.
8
Live cell imaging and proteomic profiling of endogenous NEAT1 lncRNA by CRISPR/Cas9-mediated knock-in.通过 CRISPR/Cas9 介导的基因敲入对内源性 NEAT1 lncRNA 的活细胞成像和蛋白质组学分析。
Protein Cell. 2020 Sep;11(9):641-660. doi: 10.1007/s13238-020-00706-w. Epub 2020 May 26.
9
Regulatory RNAs in Heart Failure.心力衰竭中的调节 RNA。
Circulation. 2020 Jan 28;141(4):313-328. doi: 10.1161/CIRCULATIONAHA.119.042474. Epub 2020 Jan 27.
10
linc01088 promotes cell proliferation by scaffolding EZH2 and repressing p21 in human non-small cell lung cancer.linc01088 通过支架 EZH2 和抑制人非小细胞肺癌中的 p21 促进细胞增殖。
Life Sci. 2020 Jan 15;241:117134. doi: 10.1016/j.lfs.2019.117134. Epub 2019 Dec 4.