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循环 microRNA 谱在与 SARS-CoV-2 感染相关的急性呼吸窘迫综合征中发生改变。

Circulating microRNA profiling is altered in the acute respiratory distress syndrome related to SARS-CoV-2 infection.

机构信息

Centro de Investigación Biomédica en Red de Fragilidad y Envejecimiento Saludable (CIBERFES), IMIM (Hospital del Mar Research Institute), Barcelona, Spain.

Critical Care Department, Hospital del Mar, Barcelona, Spain.

出版信息

Sci Rep. 2022 Apr 28;12(1):6929. doi: 10.1038/s41598-022-10738-3.

DOI:10.1038/s41598-022-10738-3
PMID:35484171
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9047579/
Abstract

One of the hallmarks of SARS-CoV-2 infection is an induced immune dysregulation, in some cases resulting in cytokine storm syndrome and acute respiratory distress syndrome (ARDS). Several physiological parameters are altered as a result of infection and cytokine storm. Among them, microRNAs (miRNAs) might reflect this poor condition since they play a significant role in immune cellular performance including inflammatory responses. Circulating miRNAs in patients who underwent ARDS and needed mechanical ventilation (MV+; n = 15) were analyzed by next generation sequencing in comparison with patients who had COVID-19 poor symptoms but without intensive care unit requirement (MV-; n = 13). A comprehensive in silico analysis by integration with public gene expression dataset and pathway enrichment was performed. Whole miRNA sequencing identified 170 differentially expressed miRNAs between patient groups. After the validation step by qPCR in an independent sample set (MV+  = 10 vs. MV- = 10), the miR-369-3p was found significantly decreased in MV+ patients (Fold change - 2.7). After integrating with gene expression results from COVID-19 patients, the most significant GO enriched pathways were acute inflammatory response, regulation of transmembrane receptor protein Ser/Thr, fat cell differentiation, and regulation of biomineralization and ossification. In conclusion, miR-369-3p was altered in patients with mechanical ventilation requirement in comparison with COVID-19 patients without this requirement. This miRNA is involved in inflammatory response which it can be considered as a prognosis factor for ARDS in COVID-19 patients.

摘要

SARS-CoV-2 感染的一个标志是诱导免疫失调,在某些情况下导致细胞因子风暴综合征和急性呼吸窘迫综合征(ARDS)。感染和细胞因子风暴会导致几个生理参数发生改变。其中,微小 RNA(miRNA)可能反映这种不良状况,因为它们在免疫细胞功能中发挥重要作用,包括炎症反应。通过下一代测序,分析了接受 ARDS 治疗并需要机械通气(MV+;n=15)的患者与 COVID-19 症状不佳但无需重症监护室治疗(MV-;n=13)的患者的循环 miRNA。通过与公共基因表达数据集的整合和途径富集进行了全面的计算分析。全 miRNA 测序在患者组之间鉴定出 170 个差异表达的 miRNA。在独立样本集(MV+ =10 与 MV-=10)中通过 qPCR 进行验证步骤后,发现 MV+患者中 miR-369-3p 显著降低(倍数变化-2.7)。与 COVID-19 患者的基因表达结果整合后,最显著的 GO 富集途径是急性炎症反应、跨膜受体蛋白 Ser/Thr 调节、脂肪细胞分化以及生物矿化和骨化调节。总之,与没有此需求的 COVID-19 患者相比,需要机械通气的患者中 miR-369-3p 发生改变。该 miRNA 参与炎症反应,可作为 COVID-19 患者 ARDS 的预后因素。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b53/9050749/39f813e72e0c/41598_2022_10738_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b53/9050749/cda7fd5a1af8/41598_2022_10738_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b53/9050749/ec4ce47a1bf8/41598_2022_10738_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b53/9050749/39f813e72e0c/41598_2022_10738_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b53/9050749/cda7fd5a1af8/41598_2022_10738_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b53/9050749/ec4ce47a1bf8/41598_2022_10738_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b53/9050749/39f813e72e0c/41598_2022_10738_Fig3_HTML.jpg

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