Institue of Environmental Biology, Ecology&Biodiversity, Utrecht University, Padualaan 8, 3584 CH Utrecht, the Netherlands.
Institue of Environmental Biology, Ecology&Biodiversity, Utrecht University, Padualaan 8, 3584 CH Utrecht, the Netherlands.
Protist. 2022 Jun;173(3):125870. doi: 10.1016/j.protis.2022.125870. Epub 2022 Mar 23.
Heterolobosea is one of the major protist groups in soils. While an increasing number of soil heterolobosean species has been described, we have likely only scratched the surface of heterolobosean diversity in soils. Here, we expand this knowledge by morphologically and molecularly classifying four novel strains. One was identified as Naegleria clarki, while the remaining three strains had no identical Blast hit against GenBank and could only be reliably identified to the genus level: two strains as Allovahlkampfia spp. and one strain as Vahlkampfia sp. One Allovahlkampfia strain was most closely affiliated with Allovahlkampfia sp. Nl64 and the other strain was affiliated with 'Solumitrus' palustris, which is now named Allovahlkampfia palustris comb.nov. As there are only two valid species described within Allovahlkampfia, we combined all published sequences related to Allovahlkampfia and propose five new groups within this genus. The last strain was most closely related, but clearly distinct from, Vahlkampfia orchilla, based on DNA barcoding. As such, we propose this amoeba as a new species named Vahlkampfia bulbosis n.sp. Together, our study extends the described diversity of soil heteroloboseans through the description of a new Vahlkampfia species and by revising the morphologically and phylogenetically diverse genus Allovahlkampfia.
不等鞭毛类是土壤中主要的原生生物类群之一。虽然已经描述了越来越多的土壤不等鞭毛类物种,但我们可能只是触及了土壤中不等鞭毛类多样性的表面。在这里,我们通过形态学和分子学分类来扩展这方面的知识,描述了四个新的菌株。其中一个被鉴定为克拉氏纳格尔虫,而其余三个菌株与 GenBank 中的 Blast 没有完全相同的命中,只能可靠地鉴定到属的水平:两个菌株为异变形虫属种,一个菌株为沃氏变形虫属种。一个异变形虫菌株与 Allovahlkampfia sp. Nl64 最密切相关,另一个菌株与现在命名为新组合的 Allovahlkampfia palustris comb.nov. 的“Solumitrus”palustris 相关。由于异变形虫属内只有两个有效物种被描述,我们结合了所有与异变形虫属相关的已发表序列,并在该属内提出了五个新的组。最后一个菌株与沃氏变形虫属的 orchilla 亲缘关系最密切,但基于 DNA 条形码,明显不同。因此,我们将这种变形虫提议为一个新种,命名为 Vahlkampfia bulbosis n.sp。总的来说,我们的研究通过描述一种新的沃氏变形虫物种和修订形态和系统发育上多样化的异变形虫属,扩展了土壤不等鞭毛类的描述多样性。