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时间序列 RNA-seq 分析鉴定出 MAPK10 是糖尿病诱导的小鼠心房颤动的关键基因。

Time series RNA-seq analysis identifies MAPK10 as a critical gene in diabetes mellitus-induced atrial fibrillation in mice.

机构信息

Department of Cardiology, The First Affiliated Hospital of Dalian Medical University, Dalian, Liaoning Province, 116011, China.

Department of Cardiology, The First Affiliated Hospital of Dalian Medical University, Dalian, Liaoning Province, 116011, China..

出版信息

J Mol Cell Cardiol. 2022 Jul;168:70-82. doi: 10.1016/j.yjmcc.2022.04.013. Epub 2022 Apr 27.

Abstract

Atrial fibrillation (AF) is a major complication of type 2 diabetes mellitus (T2DM) and plays critical roles in the pathogenesis of atrial remodeling. However, the differentially expressed genes in atria during the development of AF induced by hyperglycemia have rarely been reported. Here, we showed time-dependent increased AF incidence and duration, atrial enlargement, inflammation, fibrosis, conduction time and action potential duration in db/db mice, a model of T2DM. RNA sequencing analysis showed that 2256 genes were differentially expressed in the atria at 12, 14 and 16 weeks. Gene Ontology analysis showed that these genes participate primarily in cell adhesion, cellular response to interferon-beta, immune system process, positive regulation of cell migration, ion transport and cellular response to interferon-gamma. Analysis of significant pathways revealed the IL-17 signaling pathway, TNF signaling pathway, MAPK signaling pathway, chemokine signaling pathway, and cAMP receptor signaling. Additionally, these differentially expressed genes were classified into 50 profiles by hierarchical clustering analysis. Twelve of these profiles were significant and comprised 1115 genes. Gene coexpression network analysis identified that mitogen-activated protein kinase 10 (MAPK10) was localized in the core of the gene network and was the most highly expressed gene at different time points. Knockdown of MAPK10 markedly attenuated DM-induced AF incidence, atrial inflammation, fibrosis, electrical disorder and apoptosis in db/db mice. In summary, the present findings revealed that many genes are involved in DM-induced AF and that MAPK10 plays a central role in this disease, indicating that strategies targeting MAPK10 may represent a potential therapeutic approach to treat DM-induced AF.

摘要

心房颤动(AF)是 2 型糖尿病(T2DM)的主要并发症,在心房重构的发病机制中起关键作用。然而,高血糖诱导 AF 时心房中差异表达的基因很少有报道。在这里,我们展示了 db/db 小鼠(T2DM 模型)中 AF 发生率和持续时间、心房扩大、炎症、纤维化、传导时间和动作电位持续时间随时间的依赖性增加。RNA 测序分析显示,在 12、14 和 16 周时,db/db 小鼠心房中有 2256 个基因表达差异。GO 分析表明,这些基因主要参与细胞黏附、细胞对干扰素-β的反应、免疫系统过程、细胞迁移的正调控、离子转运和细胞对干扰素-γ的反应。对显著途径的分析表明,IL-17 信号通路、TNF 信号通路、MAPK 信号通路、趋化因子信号通路和 cAMP 受体信号通路。此外,通过层次聚类分析将这些差异表达基因分为 50 个谱。其中 12 个谱具有显著性,包含 1115 个基因。基因共表达网络分析表明,丝裂原活化蛋白激酶 10(MAPK10)位于基因网络的核心位置,并且在不同时间点的表达水平最高。MAPK10 的敲低显著减弱了 DM 诱导的 db/db 小鼠 AF 发生率、心房炎症、纤维化、电紊乱和细胞凋亡。总之,本研究结果揭示了许多基因参与 DM 诱导的 AF,并且 MAPK10 在该疾病中起核心作用,表明靶向 MAPK10 的策略可能是治疗 DM 诱导的 AF 的潜在治疗方法。

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