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全外显子组测序鉴定出与非梗阻性无精子症相关的基因。

Whole Exome Sequencing Identifies Genes Associated With Non-Obstructive Azoospermia.

作者信息

Zhang Hongguo, Li Wei, Jiang Yuting, Li Jia, Chen Mucheng, Wang Ruixue, Zhao Jing, Peng Zhiyu, Huang Hui, Liu Ruizhi

机构信息

Reproductive Medicine and Prenatal Diagnosis Center, The First Hospital, Jilin University, Changchun, China.

BGI Genomics, BGI-Shenzhen, Shenzhen, China.

出版信息

Front Genet. 2022 Apr 13;13:872179. doi: 10.3389/fgene.2022.872179. eCollection 2022.

Abstract

Non-obstructive azoospermia (NOA) affects nearly 1% of men; however, the landscape of the causative genes is largely unknown. To explore the genetic etiology which is the fundamental cause of NOA, a prospective case-control study and parental-proband trio linkage analysis were performed. A total of 133 patients with clinicopathological NOA and 343 fertile controls were recruited from a single large academic fertility center located in Northeast China; in addition, eleven trio families were available and enrolled. Whole exome sequencing-based rare variant association study between the cases and controls was performed using the gene burden association testing. Linkage analysis on the trio families was also interrogated. In total, 648 genes were identified to be associated with NOA (three of which were previously reported), out of which six novel genes were found further associated based on the linkage analysis in the trio families, and involved in the meiosis-related network. : The six currently identified genes potentially account for a fraction (3.76%, 5 out of 133 patients) of the heritability of unidentified NOA, and combining the six novel genes and the three previously reported genes together would potentially account for an overall 6.77% (9 out of 133 patients) heritability of unidentified NOA in this study.

摘要

非梗阻性无精子症(NOA)影响着近1%的男性;然而,致病基因的情况在很大程度上尚不清楚。为了探究作为NOA根本原因的遗传病因,进行了一项前瞻性病例对照研究和亲子三联体连锁分析。从位于中国东北的一个大型学术性生育中心招募了133例临床病理诊断为NOA的患者和343例有生育能力的对照;此外,有11个三联体家庭可供使用并被纳入研究。使用基因负担关联测试对病例和对照进行基于全外显子组测序的罕见变异关联研究。还对三联体家庭进行了连锁分析。总共鉴定出648个与NOA相关的基因(其中三个此前已有报道),基于三联体家庭中的连锁分析又发现其中六个新基因进一步相关,且这些基因参与减数分裂相关网络。这六个目前已鉴定的基因可能占未明确病因的NOA遗传度的一部分(133例患者中的5例,占3.76%),在本研究中,将这六个新基因和三个此前报道的基因合并在一起可能占未明确病因的NOA总体遗传度的6.77%(133例患者中的9例)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/658a/9043847/2fb320005821/fgene-13-872179-g001.jpg

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